Gene Shew185_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3388 
Symbol 
ID5370751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4022297 
End bp4023232 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content50% 
IMG OID640831648 
Producthypothetical protein 
Protein accessionYP_001367578 
Protein GI153001897 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.982204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGCG CAAGTTTATT AACCTTACTT GACGATATCG CATCGATTTT GGATGACGTA 
GCGGTAATGA GTAAAGTGGC GGCAAAGAAA ACCGCGGGTG TACTGGGGGA CGATCTAGCT
CTCAATGCCC AGCAAGTCAC AGGCGTGAGT GCCGAGCGTG AATTACCTGT CGTTTGGGCG
GTAGCTAAGG GATCGTTTCG TAATAAATGC ATTTTAGTGC CCGCAGCCCT GCTGATCAGC
GCCTTTATTC CTTGGGCGGT AACACCGTTA TTGATGTTTG GTGGACTGTT TTTATGTTAC
GAAGGGTTCG AAAAACTGCA CCACAGCTAT AGCCACAGAA AAGGCCTACC ACACAGCGAA
ACGCAAGAGG AAAGCGAACT TCCAGACATC AAAGATTTAG CCGCTTACGA GGCTGAAAAA
GTCAAAGGCG CGATTCGTAC CGACTTTGTG TTATCGGCGG AGATTATCGC GATTACCTTA
GGCATAGTGG CGAACAAATC CCTGTCGACG CAGTTTTTCA CCTTATCCGT TATCGGGATC
ATCATGACCA TAGGTGTGTA TGGTTTAGTG GCCGCGATTG TGAAAATGGA CGATGCGGGT
TTGTACTTGA GTCAGCGTGA AGGCGAGTCG GCATTAACGC AAATGAACCG TAAACTGGGT
TTTGGTTTAT TGAGCGCCGC ACCTGTGCTG ATGAAAAGTT TAACCATTAT CGGCACTGCG
GCCATGTTTA TGGTGGGCGG CGGGATTTTA ACCCATGGCT TACACATGAT TGGCGAGCAA
ATCCAGCATG CTGAGCAAGC CGTCGCGGCG ATGAGTTTTG TCGGACCTGT GCTTGCCGTG
CTGACGCCAA GTGTGCTCAA CGGCCTATTT GGCGTTGTTG CTGGCGCAGT CGCACTTGCT
GTGATGACAG GGATACAAAA ACTGCGTGGC GAGTGA
 
Protein sequence
MAGASLLTLL DDIASILDDV AVMSKVAAKK TAGVLGDDLA LNAQQVTGVS AERELPVVWA 
VAKGSFRNKC ILVPAALLIS AFIPWAVTPL LMFGGLFLCY EGFEKLHHSY SHRKGLPHSE
TQEESELPDI KDLAAYEAEK VKGAIRTDFV LSAEIIAITL GIVANKSLST QFFTLSVIGI
IMTIGVYGLV AAIVKMDDAG LYLSQREGES ALTQMNRKLG FGLLSAAPVL MKSLTIIGTA
AMFMVGGGIL THGLHMIGEQ IQHAEQAVAA MSFVGPVLAV LTPSVLNGLF GVVAGAVALA
VMTGIQKLRG E