Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3384 |
Symbol | |
ID | 5369400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4018136 |
End bp | 4019152 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640831643 |
Product | phage integrase family protein |
Protein accession | YP_001367574 |
Protein GI | 153001893 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000032973 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAC GTAAACCTGA GGATGCTTGG TTACCACCTT CAGTCTACAT TCATCGCCGT GCTGGAAAGC CAATTTGTTA TGTGATTAAG CGTCCTAACT CGACTAAGGT GCTGTGCAAA ATCACGGCGA GTAAAGCCGA GGTATGGACT GCATACGAAA AGGCAGTTGC TGAGTTTAGC CTTGAGTACA CGGTTAACCG TTTAGCGATG GAGTATTTGG ATAGTGCAAA CTTTAAAGAG CTTGCCCCCA GAACCCAGCG AGATCGGGAC CGTGAACTTA ATGTGTTCAG TAAAGTGTTT GGCAGTATGT TACCGGACCG AATTGAGCCA CATCATATTA GGCGCTATAT GGATCTAAGG GGGCAATCAA GTAAGACCCA AGCAAACCAT GAACTCGCGG CAGCTAGCGT GATGTTTGCT TGGGGTTATG AGCGTGGACG CTGTAAAAGC AACCCCGCAA AAGGGGTTAA AAAGTTTAAG GTAAAGGCTC GCGATAGATA TATTACTGAT GCGGAGTTCA ACGCTCTGCT TTCATGTGCA GAGATAAGGT TAAAAATTGC CTGTGAAATA AGTTACCTAT GTGCAGCAAG GCAAGGTGAT GTTTTGCAAT TAACTTGGTC GCAGGTTAAT GAAGATGGCT TGTTTATCCA ACAGGGTAAA ACAGGGAAAA AGCAAATCAA AGCTTGGTCG CCTCGACTGC GAAAAGCGAT TGCCGAAGCA AGAACTCTGC ATTCAGGCAT TGCCAGTATT TATGTCATTA ATAAACATCC CAGCGGGAAA TTAACACAAG ATGGATTGCG CAGTGCTTGG AAGCGAGCGA TGGCAAAAAT GGAAATGGAT TATCCGCAGA TTGAACGCAC TTTCACGTTC CATGATATTA AGGCTAAAGG TGTATCAGAC TTTGAGGGAA CACTGTCAGA GAAGCAACAA TACTCGGGCC ATAAAACCTT GGCACAAGTG AACACCTACG ACAGGAAAGT GGAAATAGTA CCGACAATTG GTAGCGTTAA AAAATGA
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Protein sequence | MRKRKPEDAW LPPSVYIHRR AGKPICYVIK RPNSTKVLCK ITASKAEVWT AYEKAVAEFS LEYTVNRLAM EYLDSANFKE LAPRTQRDRD RELNVFSKVF GSMLPDRIEP HHIRRYMDLR GQSSKTQANH ELAAASVMFA WGYERGRCKS NPAKGVKKFK VKARDRYITD AEFNALLSCA EIRLKIACEI SYLCAARQGD VLQLTWSQVN EDGLFIQQGK TGKKQIKAWS PRLRKAIAEA RTLHSGIASI YVINKHPSGK LTQDGLRSAW KRAMAKMEMD YPQIERTFTF HDIKAKGVSD FEGTLSEKQQ YSGHKTLAQV NTYDRKVEIV PTIGSVKK
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