Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3360 |
Symbol | |
ID | 5369908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4002938 |
End bp | 4003897 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640831619 |
Product | integron integrase |
Protein accession | YP_001367550 |
Protein GI | 153001869 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATAA AAAGCCCTTT TTTAAGCGGT GTTCAAGAAG AAATGCGCAT GCGTGGTTAC AGTATCAGAA CAGAAAAATC CTACCTGTAT TGGATCAAGG CGTTCATTAA CTTTCACCAC AAGCGTCATC CTGAAACGAT GGGAACAGAG GAGGTCGCAC AATTCTTAAC CTTCCTTGCC AATCAACGGA ATGTGGCTAT CAACACTCAA AAAATTGCAC TGAACGCGTT AGCCTATTTG TACCAGAAAC ATTTGCATCA TGAGCTTGGA AATTTAGGTT TTTGCTATGC CACTAAACAA CGTTATTTAC CTACAGTGTT ATCCCCATCA GAAATCTCAC TAATACTAAA TGAGCTTGAT GGCCGCGATA GGCTAATAAT AGAACTACTC TATGGTAGTG GACTTAGAGT TTCAGAATGC CTCAGGTTAC GTGTCCAAGA TATTGATATT GAACAAGCTT CGTTGACTGT GAGGGATGGT AAAGGTCATA AAGATAGACA AATAATCCTT AGCCATAAAT GTGCCATTAA ACTCACAGCA TATATTAATA AAGCAATGGA GATTCAACAC AGTGACAACC AACAAGGGAT CGGTCCTTCC CTACCCAATG CGTTAGAGCG TAAGTATCCA AATGCCTTTA AGCAACACGG ATGGATGTTC ATTTTCCCTT CAACCACAAC CTGCATTAAT CCTTATACAG GAACGCTTTG CAGGCATCAT CTTCATCAGA GTGTTATTCG TAAAGCGCTC GGCAATGCGG TGCGTAACAT CAAAATAACT AAGCGTGTTA CCTGTCATAC ATTTAGACAT AGCTTTGCAA CCCATCTACT TCAATCGGGC AGTGATATCA GAAGTGTTCA GGAGCTACTT GGCCATAATG ACGTTAGTAC AACGCAAATC TACACCCATG TGCTTGGCCA ACATTACGCA GGGACAACGA GTCCATTAGA TAAGTTATAA
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Protein sequence | MSIKSPFLSG VQEEMRMRGY SIRTEKSYLY WIKAFINFHH KRHPETMGTE EVAQFLTFLA NQRNVAINTQ KIALNALAYL YQKHLHHELG NLGFCYATKQ RYLPTVLSPS EISLILNELD GRDRLIIELL YGSGLRVSEC LRLRVQDIDI EQASLTVRDG KGHKDRQIIL SHKCAIKLTA YINKAMEIQH SDNQQGIGPS LPNALERKYP NAFKQHGWMF IFPSTTTCIN PYTGTLCRHH LHQSVIRKAL GNAVRNIKIT KRVTCHTFRH SFATHLLQSG SDIRSVQELL GHNDVSTTQI YTHVLGQHYA GTTSPLDKL
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