| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3351 |
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| Symbol | |
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| ID | 5370002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3994654 |
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| End bp | 3995916 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640831610 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001367541 |
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| Protein GI | 153001860 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTG CTGAATCAGT AGAGGCCCTC GCACTTTATT TAAATCATCA ACGGATTGCG
ATACTCACCC ATTATTCAGG TGGTAAAAAC ATTCTGAAAT TTGACCCTGA ATATATCGCG
ATGCCAAAAG CACTTCGACC AACATTAACG CTCACCCAGC TGCTAGACCC ACATTACATC
GATAAAATAC AAGTCAGAAC ACAAAGATTA TCACCGGTGC TGTCCAATTT GCTCCCCGAG
GGCGCATTGC GGCACTGGAT GTCAGCCGCG CTAAAAGTAC ATGAAAACAA CGAATTTCCT
ATCCTAGCAT GGGCAGGGAA CAATCTTCCC GGCGGCTTAA TAGCATCAGC CATAGCAAAA
GAGAATATTC CAGCCTGGGC ATTATCACCA CGAGAAAGAA CAGAAGCCAT CGTAATCGAC
ATCACCCACA CCAGTAATAA GTTCTCACTT GCCGGTGTTC AAATGAAATT CTCGACGAGC
AGAAACGATG GACGATTCAA CATAAATGCC AATCAAGAAG GCCAAGATAG TTGGATTATC
AAGACGCCTT CAACAGTACA CCGCAACGTC CCACAAAATG AATACACCGC AATGAAGTTG
GCACAAATAA TCGGAGTAAA TATCCCTGAA ATTGAGCTCA TTTCACTTAA CGCATTGGAT
AATTTACCTA ACATCAAACT CCCAGATGAA CCAACGGCTT ATGCAATTAA GCGCTTTGAC
CGCAGTGATA CGGGCCGCAT TCATGCAGAA GACTTTGCCC AAATATTCGA AATTTACGCT
CATGATAAAT ACGGTAAATA CAACTACGAA GCCATAGCTA AAGCTCTATA CATGAGCAGC
TACAATGGAT TAAAAGATGT GCAGCAAATG GCAAGGCGGT TGCTGGCCAA TATCTTGCTC
GCCAACGGTG ATGCCCACTT AAAAAATTGG AGTGTTATCT ACCCTGATAC CCAAAATGCG
ATACTCTCAC CCGCTTACGA TATTGTGAGC ACCTTACCCT ACATAGAAGG CGAAACCGCC
ATAGCCCTCA ACATGAATAA ACAAAAGCTA TGGTACGCCA TAGATATCGC GACCTTCCAA
GCATGGGCAA CGAGAACAGG CCTACCATGG CCCGCGATAA AGGTTCATTT ACTGGATGTC
ATGCAAAAAG CCCGTACTCT TTGGCCAAAG GCACTTGCTG AACTCCCCAT GCATGAAGTG
CATAAAACGA TATTAAAAGC TCACTGGGCC AAACTACATA ACGACTTTAA AATCCTCTGC
TAG
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| Protein sequence | MKPAESVEAL ALYLNHQRIA ILTHYSGGKN ILKFDPEYIA MPKALRPTLT LTQLLDPHYI
DKIQVRTQRL SPVLSNLLPE GALRHWMSAA LKVHENNEFP ILAWAGNNLP GGLIASAIAK
ENIPAWALSP RERTEAIVID ITHTSNKFSL AGVQMKFSTS RNDGRFNINA NQEGQDSWII
KTPSTVHRNV PQNEYTAMKL AQIIGVNIPE IELISLNALD NLPNIKLPDE PTAYAIKRFD
RSDTGRIHAE DFAQIFEIYA HDKYGKYNYE AIAKALYMSS YNGLKDVQQM ARRLLANILL
ANGDAHLKNW SVIYPDTQNA ILSPAYDIVS TLPYIEGETA IALNMNKQKL WYAIDIATFQ
AWATRTGLPW PAIKVHLLDV MQKARTLWPK ALAELPMHEV HKTILKAHWA KLHNDFKILC
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