Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3341 |
Symbol | |
ID | 5370390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3980537 |
End bp | 3981319 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640831600 |
Product | ABC transporter related |
Protein accession | YP_001367531 |
Protein GI | 153001850 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4604] ABC-type enterochelin transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000683738 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTACCG TCAATAACTT ACATCATTCT TATGGCGCGA AACCTGTGCT TAAAAATGTT ACCACGCAAT TTCCCGAACA TCAGATTACA TCACTCATTG GTCCCAACGG CGCTGGCAAA AGTACCTTAT TGATGTCGAT TGGTCGGTTA CTGAATATCC AGCAGGGCGA GGTATTACTC AAAGGTACTG CTATCCACAA CATTCCCCTG AAGGATTACG CCAAGCAAGT GGCAACCATG CGTCAGTTTA ACAGCCTCAA TTTACGCCTG ACGGTCAGGG AGTTAGTGGC ATTTGGTCGC TTTCCCTATA GTCGAGGCAC ACTCACAAAG GCAGATCATT GTGCCATTGA TGAAGCTCTG TCGTTTTTAG ACTTACAGTC ATTAGCTAAT GCATTTATCG ATGAGCTTAG CGGCGGACAA CGCCAAATGG CCTTTCTGGC AATGGCGATT GCACAGCAAA CAGATTATTT ATTGTTAGAT GAACCACTCA ATAATCTGGA TATGAAACAT GCCGTTAGCA TAATGCGGGC GCTTCGCCAT CTGTGTGACG ACTTCAAGCG AACGGTAGTG TTAGTGGTTC ACGATATCAA TTTTGCGGCT AATTACTCCG ACTATATTGT CGGCATGAAG CAAGGCGCTG TGCATTGCGA AGGACCCGTT GAAGAGGTTG TTACAGCACA AAGGTTAAAA GCACTGTACG AACTGGATCT TGAAGTGCTG AAAACGAGCC AAGGAACAGT TTGTAACTAT TTCAACTTCA ACTTACAAGG AGAATACAAG TGA
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Protein sequence | MITVNNLHHS YGAKPVLKNV TTQFPEHQIT SLIGPNGAGK STLLMSIGRL LNIQQGEVLL KGTAIHNIPL KDYAKQVATM RQFNSLNLRL TVRELVAFGR FPYSRGTLTK ADHCAIDEAL SFLDLQSLAN AFIDELSGGQ RQMAFLAMAI AQQTDYLLLD EPLNNLDMKH AVSIMRALRH LCDDFKRTVV LVVHDINFAA NYSDYIVGMK QGAVHCEGPV EEVVTAQRLK ALYELDLEVL KTSQGTVCNY FNFNLQGEYK
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