Gene Shew185_3341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3341 
Symbol 
ID5370390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3980537 
End bp3981319 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content45% 
IMG OID640831600 
ProductABC transporter related 
Protein accessionYP_001367531 
Protein GI153001850 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4604] ABC-type enterochelin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000683738 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTACCG TCAATAACTT ACATCATTCT TATGGCGCGA AACCTGTGCT TAAAAATGTT 
ACCACGCAAT TTCCCGAACA TCAGATTACA TCACTCATTG GTCCCAACGG CGCTGGCAAA
AGTACCTTAT TGATGTCGAT TGGTCGGTTA CTGAATATCC AGCAGGGCGA GGTATTACTC
AAAGGTACTG CTATCCACAA CATTCCCCTG AAGGATTACG CCAAGCAAGT GGCAACCATG
CGTCAGTTTA ACAGCCTCAA TTTACGCCTG ACGGTCAGGG AGTTAGTGGC ATTTGGTCGC
TTTCCCTATA GTCGAGGCAC ACTCACAAAG GCAGATCATT GTGCCATTGA TGAAGCTCTG
TCGTTTTTAG ACTTACAGTC ATTAGCTAAT GCATTTATCG ATGAGCTTAG CGGCGGACAA
CGCCAAATGG CCTTTCTGGC AATGGCGATT GCACAGCAAA CAGATTATTT ATTGTTAGAT
GAACCACTCA ATAATCTGGA TATGAAACAT GCCGTTAGCA TAATGCGGGC GCTTCGCCAT
CTGTGTGACG ACTTCAAGCG AACGGTAGTG TTAGTGGTTC ACGATATCAA TTTTGCGGCT
AATTACTCCG ACTATATTGT CGGCATGAAG CAAGGCGCTG TGCATTGCGA AGGACCCGTT
GAAGAGGTTG TTACAGCACA AAGGTTAAAA GCACTGTACG AACTGGATCT TGAAGTGCTG
AAAACGAGCC AAGGAACAGT TTGTAACTAT TTCAACTTCA ACTTACAAGG AGAATACAAG
TGA
 
Protein sequence
MITVNNLHHS YGAKPVLKNV TTQFPEHQIT SLIGPNGAGK STLLMSIGRL LNIQQGEVLL 
KGTAIHNIPL KDYAKQVATM RQFNSLNLRL TVRELVAFGR FPYSRGTLTK ADHCAIDEAL
SFLDLQSLAN AFIDELSGGQ RQMAFLAMAI AQQTDYLLLD EPLNNLDMKH AVSIMRALRH
LCDDFKRTVV LVVHDINFAA NYSDYIVGMK QGAVHCEGPV EEVVTAQRLK ALYELDLEVL
KTSQGTVCNY FNFNLQGEYK