| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3340 |
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| Symbol | |
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| ID | 5370394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3979521 |
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| End bp | 3980540 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640831599 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_001367530 |
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| Protein GI | 153001849 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4607] ABC-type enterochelin transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.002385 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGTCGA AATGTAAAAG CGGTACTAAA GTGATGGCGA TTCTGTTATT TAGCTCGGCT
TTTTTGCTGG CCTGCGACAA TAAAAGCGAG CCAGTACAGC AGACGATTCT TGCAACGTCT
GATACTAGCG AGTCAAATTT TACACCTGTT GAAATAACCC ATAAGTTGGG CACTACAGTT
ATTACAAAAC GGCCGGTACG CGTTGCAGCC CTCGATATGA ATGAAGTCGA TTATCTCGAA
CAGCTTGATA TTCCCATTAT CGGCATGCCA AAGGATTTTG TTCCTTACTA CCTGCAGGAC
TATAGCAACA ACAATGATAT CGTTGATTTA GGCGCCATAG TTCAGCCCAA TATGGAACGT
ATTTATGCAC TTAAACCCGA TTTGGTGCTG ATGTCATCTA TTCAAGCAAC TCATTATCAG
GCGCTTTCGA ATTTGGCTCC GACCATTCAT TTGGATATTG ATTATCAAGA CAGCAACAGC
GATTACTTTG ATATAGTCAA ACAACACTTG TTGGTGCTGG GGAAAGTATT TGATAAGCAA
ACCTTGGCAA AACATAAAGT GGATGAACTG GAAAGTAAGA TCGAAGCCGC CAGAATGGTT
ATTCAGGATA GGCCTGAGAA AGCACTCGTG GTGTTACATA ATAATGGTGC TTTTCGATTC
TTAGGTATTC GTTCTCGGTA TGGGTTCATT TACAGTGGGC TAGGGGTTAA ACCCGCTAGT
TTATCAGAGC AGATGGGATT GCATGGCCAA CCCGTGTCAA GCGAGTTCAT TCTTGAAAAC
AATCCTGACA TCATTTACGT GGTAGACAGA ACCGCAGTAA TGGAGCGAAG CCCTGTATTG
GATAAACAGT CCATAGATAA CCCTCTCTTG CGTGAGACGA ATGCTTGGAA GACGGGGAAC
ATCATTTTTG TAGATCCTGA GGCTTGGTAT ATCACAGGGG CCGGAATAAC ATCCCTTAAC
ATCATTATTG ATGATGTATT AAAGGGCTAT GTAAAGGAGC CGCTGGCTGT AAGTCGTTGA
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| Protein sequence | MTSKCKSGTK VMAILLFSSA FLLACDNKSE PVQQTILATS DTSESNFTPV EITHKLGTTV
ITKRPVRVAA LDMNEVDYLE QLDIPIIGMP KDFVPYYLQD YSNNNDIVDL GAIVQPNMER
IYALKPDLVL MSSIQATHYQ ALSNLAPTIH LDIDYQDSNS DYFDIVKQHL LVLGKVFDKQ
TLAKHKVDEL ESKIEAARMV IQDRPEKALV VLHNNGAFRF LGIRSRYGFI YSGLGVKPAS
LSEQMGLHGQ PVSSEFILEN NPDIIYVVDR TAVMERSPVL DKQSIDNPLL RETNAWKTGN
IIFVDPEAWY ITGAGITSLN IIIDDVLKGY VKEPLAVSR
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