| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3339 |
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| Symbol | |
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| ID | 5370393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3976072 |
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| End bp | 3978837 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640831598 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001367529 |
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| Protein GI | 153001848 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000713907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTTC AGAGAATGGA TAAGATAATG AAAAATAATA AATTCAAGCT CAGCAAAGTC
GCAATTGCAT TGCTCCCTTT ATGCTATGTA ACCCATGGCT TTGCTGCGGA AGATGAAACT
AAAAAAGACA CCACGCCAGT TGCGGCTACT GCCGAAGAAA AAGTTGAGGT GATAGAAGTT
AGGGGATTTG CCTCAACCCT AAAACAATCG CTGTTTAGCA AGCGTACTTC ATCGCAAACG
GTGGAAACGA TTTCTACCGA TGATCTTGGC AATATGCCTG ATGTGACCAT TACCGATGCA
CTTGCTCGTC TGCCTGGGGT GGCAGCCGAT CGCGATCGCG GTAACCCAAG TCGTATTTCA
ATTCGTGGTA TGGGACCACG TTTGAATATG GCAACGATGA ATGGCCGTGA AATTGTTAGC
GGTGAACCAA GCCGTGATGT GCGCTACGAA CAATTTCCCG CAGAACTGAT TAATGCGGTA
CAAGTTTATA AAAGTCCGAC GGCAAGTAAT ATCGAAGGCG GTATTTCTGG CTTAGTGAAT
ATGGACTTTG TGAGTCCATT AGCGCAAAGC GAACGTAAAG TGACCTTGAG TGCCAATGGC
ATGTATTACG ATCTGGCCGA TGAATTGCCG GACGGACAAA CTACAGGCTC TAAATTGAGC
TTTAGTATGG TTGATAAAAT CACCGATGAT TTAGGCTATG CCTTTGGTAT TGCTTATCAA
GATCAGCCTT CTGTGCAACG TGGAACTAAG AGCTGGAATT ACAATAATGG CGCAGATAGA
GGCGACATTA ATGGTAATGG CATCCAAGAG TCTACGCCTT GGGGCGGGCA ATCTGGCACT
AAAATCGGTA ATAACAAACG CTTAGGCACT ATGGGGATCC TAGAGTGGCA AGCAAGCGAT
AAGCTAAAAC TCAAATACGA TCTGTTTTAC TCTAAGTTTA AAATTGAAGA ACATGAAGAT
CAGATGTACT TCAATAATTT AGGTAACTAT CAAAGCGGCC AAAATTGGAA CTACAACCAT
TCTGCAGCTC AGCCTGACAT CATTACCAAA GCCGATGGCA GCGAGCAGTT AGTGGGAGGT
GGATTGGCTT ATGCCAGTCA CGAAGTGCAT AACGCGACTT GGTTCCAAGA AAACCAATTG
CTGAGCACAG GTTTGAATGC CGTATGGGAA GGGGACGTTT GGCGAATTAA GGCCGATGTC
GGTTTTTCTA AGGCGCAAAT CGATTCTGTC TGGGTCGATA TCATCTCTAG CTACAACGGC
CCAAGCTATG ACTTAGGTTG GAGTGTGGCC GATGGTAATA GTTTTAGCGC AGAAGTACTT
GATAATCCGG CGGAAGGATT AAGCGCGATA GACATAGCTA ACCCAGATTA TTACACCTTA
GGTGCAATGA AATGGGTGGA AACCACACCA GGTGTTTGGG AAGAGCAAAA TATTGGCATG
ATCGGGGATA ACGACCGTGA TCTGTCGGAT AAAATGGTCA ATACCCGTTT AGACTTCGAG
CGTTATGTCG ATTGGGGAGT TTTCGATCAG CTGAGCTTTG GTGTGCGTTA TTCGGATAGA
GATAAACAAA ACCGTGTTGT CGATTGGCAA AAAGCCGTTA TCGCGGGCAA TGGTTTAAGC
AACTATGGCA GCAGTTATAC CCTTGGAGGC GATTATAAAG TCCCTAACCT TTATGCTCTG
AAGGATTGGG ATAATGTGGC GAGTGTTGCC TTTGGTGGTC GAGGCACAGC GGATTACTCA
CTGCAAAACA ATGCTGACAA ACTTGCTTCT TGGGGGCTGA CTGAAAAGAA CAGTGCTGCT
TATGCCATGT TGAACATCAA CAGTGAATGG GGTGATATGC CTTATTCGGG CAATTTCGGC
ATTCGCGTTG TCAACACGCG TTCAACCTCA GAAGGCTATG AGCAGTTGCT CGATGGCTCT
CTCGCTCCAG CAAGTGTCGA TCATGAATAC ACTGAGGTGC TGCCGTCACT TAACTTGCTG
TTTAATGTGA CTGATGATTC GCAAATCCGT TTTGGCCTAG CTCGTACTAT GTCACGTCCT
CCATTGATTG AGATGCGCAC CGGTTTCTCC ATCGATACCA CAGTGACGCC CAATACCGCT
TCTGGCGGTA ATCCTGAGTT AGACCCATAT ATTGCCAATC AGGTTGACCT TGGTTACGAG
TATTACTTCT CTGACAGTGG CGCCATGACA GTGTCTTTCT TCTACAAAGA CATGCAAAGC
CATATAGGTA TCGCGACCAG CACTAAAACC TTAGAAGGTG TCGATTATGA ATATAGCGGC
CCAATTAATG GTGATGGTGG AGCGATTAAA GGTTTTGAAG TCTTGTATCA ACAAAGCTTT
GATTTCTTAC CTGCACCCTT CGATGGTTTA GGTGTTTATG CCAACTACTC CTATACAGAT
TCTGCCGTGG AAGAGTTCAC GCCACAGGAT AATCCATACA CTTTGGCGGG GTTGTCTAAA
AATGTGGGCA ACGTGACCTT ATGGTATTAC AAAGAAGGAT TTGAAGCTCG AGTGGGTTAC
GACTACCGCA GTGAATACAC AGGTATCAAT AGCTGGGATC CGAGTCAAAT CTCTTTATAT
GATGCTCAAG GTACGGTTGA TGCGAGTATT TCTTATCAGT TCACCGATAA CTTTAAAGTG
ATGTTGCAGG GCCAAAACCT GACCAACGAA GCGTCAACAA GTTACTGGGA CAACGATAAA
ACCCGTCTAG CAGAAAATGT GGAATGGGGT CGCCGTTACG TGCTGGGCTT TACGCTCGCG
ATGTAA
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| Protein sequence | MNVQRMDKIM KNNKFKLSKV AIALLPLCYV THGFAAEDET KKDTTPVAAT AEEKVEVIEV
RGFASTLKQS LFSKRTSSQT VETISTDDLG NMPDVTITDA LARLPGVAAD RDRGNPSRIS
IRGMGPRLNM ATMNGREIVS GEPSRDVRYE QFPAELINAV QVYKSPTASN IEGGISGLVN
MDFVSPLAQS ERKVTLSANG MYYDLADELP DGQTTGSKLS FSMVDKITDD LGYAFGIAYQ
DQPSVQRGTK SWNYNNGADR GDINGNGIQE STPWGGQSGT KIGNNKRLGT MGILEWQASD
KLKLKYDLFY SKFKIEEHED QMYFNNLGNY QSGQNWNYNH SAAQPDIITK ADGSEQLVGG
GLAYASHEVH NATWFQENQL LSTGLNAVWE GDVWRIKADV GFSKAQIDSV WVDIISSYNG
PSYDLGWSVA DGNSFSAEVL DNPAEGLSAI DIANPDYYTL GAMKWVETTP GVWEEQNIGM
IGDNDRDLSD KMVNTRLDFE RYVDWGVFDQ LSFGVRYSDR DKQNRVVDWQ KAVIAGNGLS
NYGSSYTLGG DYKVPNLYAL KDWDNVASVA FGGRGTADYS LQNNADKLAS WGLTEKNSAA
YAMLNINSEW GDMPYSGNFG IRVVNTRSTS EGYEQLLDGS LAPASVDHEY TEVLPSLNLL
FNVTDDSQIR FGLARTMSRP PLIEMRTGFS IDTTVTPNTA SGGNPELDPY IANQVDLGYE
YYFSDSGAMT VSFFYKDMQS HIGIATSTKT LEGVDYEYSG PINGDGGAIK GFEVLYQQSF
DFLPAPFDGL GVYANYSYTD SAVEEFTPQD NPYTLAGLSK NVGNVTLWYY KEGFEARVGY
DYRSEYTGIN SWDPSQISLY DAQGTVDASI SYQFTDNFKV MLQGQNLTNE ASTSYWDNDK
TRLAENVEWG RRYVLGFTLA M
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