| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3338 |
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| Symbol | |
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| ID | 5370363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3973634 |
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| End bp | 3975979 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831597 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001367528 |
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| Protein GI | 153001847 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0252466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTCA AGTTGTTGTT TGCAATAGCA TTGCTGTGTA TCTCCAGCGT GCAAGTGCAG
GCTTCGCCAC AGGCGCAGAC TGCCATCAAA CTGTCGTTCA ACGAAGATTG GCAATTCCAA
AAGTCACCCG CCCACGCTAC CGCGTTTCAG CCTGAGGCTA AAGCATGGGA AAAAGTGAGC
TTACCCCATA CACCAAAGCT TGAACCCCTA CTGGTCAATG ACCAATGGCA GGGTATTGCC
CTGTATCAAA AGCAATTTAA TGCTCCTAAA TCTTGGCAAG GACAGCGGCT TTACCTGCGT
TTTGAAGGTG CAATGAACCA CACTAAAGTC TGGTTAAACG ATAAACCTGT GGGTGAACAT
TTAGGCGGAT ACCTTCCTTT TAGCATCGAT ATTTCAGCTG CGGTTAATTA CGGTGCGGAC
AACCAGTTAC GGGTGGCGTT AGACAATAAC GACAATCCAA TTACCGGTCC TAAACCACTA
CATTTACTCG ACTTTAATAC CTATGGTGGT TTGTACCGCG ACGTTAATTT ATTCATTAAA
GCACCGCTGC ACATCAGCGA TGAGATGCTG ACGAATTTAC CGAACCGTGG TGGTTTAGTG
ATTTCGAGCA AGATCGACGA TAAGGCTAAG GCGAGTGTGG CCGTTCAGGC CGATATCCGT
AATCAAGGCA GTAAAGCGGC TCAGTTCACC TTAAAACAGG TGCTTGAGTT CGACGGTAAA
GTGGTTGCAA CAATAGCGCA AAGCTACACT TTGGCAGCTA ATAGCCAGCA AGTTTTCAGC
CAGAACTTAA CGGTAAAACA GCCAAAGTTA TGGCATCCAA CCCATCCGAA TCTTTATCAA
TTGCAGACTG AACTCTGGCA AGGCAACACC TTGCTCGAGC GAAGCAGTAA TAAGGTCGGT
ATCCGTGAAT TTGCCTTTAA TGCCAAGCAT GAATTGTTGA TTAACGGCGA ACCCTATTTC
CTGCGCGGTA TAAATCGTCA TCAAGATTAT CCCCATGTCG GTTATGCCAC CTCAAAACAA
GCCGATTACC GTGATGCCAT CAAGATCAAA GAAGCCGGAT TTGATTATGT TCGCTTATCT
CACTATCCCC ATTCGCCCGC CTTTATGGAC GCCGCCGATG AAGTTGGGCT AGTGCTGATT
GATGCCGTAT TAGGTTGGCA GTATTTCTCA CCTGAGCCTG AGTTTGCTGA GCATGTGTAT
CAGTCTTGCA GAGATCTACT GCGCCGCGAT CGTAACCACG CCAGCGTGTT AGCGTGGGAA
TGCTCGCTCA ATGAAACTCC AATGCCAGTG GCCTTTATCG ACAATCTGAA AGCCATCATT
CAGGCGGAAC TTCCTGGTGC AATGTCTGCA GGTTGGCAAA CGCAATACGA TATCTATCTG
CAAGCTCGTC AACATAGAAT GCAGCATTAT CAAACACCGA CTCAGCCATA CAATGTGTCT
GAATACGGCG ATTGGGAATA CTACGCCCAA AATGCAGGCC TAAACCAACA GGCGTGGGCC
GATCTTAAGG ATGATGAACG CACCAGTCGG CAGCTACTCG GTGCTGGTGA AAAGCGTTTA
CTACAACAGG CAATGAACCT ACAGGAAGCC CATAACGATA ATTTGCACAC GCCCGCGTTT
GCCGACGGTT ATTGGGTGAT GTTTGACTAT AACCGTGGCT ATGCGAATGA CTTAGAGTCC
TCGGGCATTA TGAGCATCTA TCGTCAACCT AAGTTCAGCT ATTACCTGTT CCAAAGTCAG
CGCGACCCCG CGCTAACGTC AACCCAATAC AATGCCGGAC CTATGGTGTA TATCGCCTCA
GATTGGCAAG CGGACTCTTC GCCAAATGTT CGGGTGTACA GTAACGCGGA TGCCGTCGAG
TTATGGCTAA ACGGCAAATT AATTGCCCGT CAAACACCCG ATAACGGCGC GAATACCGAC
AAGTTGCCCC ATCCACCTTT TACTTTCCAT CTGCCCAGTT TTGAGGCGGG AGAGCTAAGT
GCTAAAGCCT TTATTGGCAA TCAGTTAGTC GCGACGCACA GCGTTCGTAC TCCCCAAGCG
ATTCATGCGC TTGAGATTTC ACTCGATACC GCAGGTGTGC CGATTAATTC CGCTGGCAGC
GATGTGCTGT TTGTGAATGT CAGATTGGTT GATGCCAATG GCACCACAGT GCCAGTGAAT
GACAAGGTGG TGAGCTTTGA AGTCAATGGC GTGATTCAAG TGCTCAATCC GGATGCGATA
GTGACAGAAA AGGGCGTTGC CAGCGCATTG GTACGAGTGC ATAACGGTGC AAAAGGCGCG
CACTTAAAAG CCTCTTTTGC GGCAGAAAAC ACAGCTGCGC CGTTAACTGC TGAGCTGAAA
TTCTAA
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| Protein sequence | MYFKLLFAIA LLCISSVQVQ ASPQAQTAIK LSFNEDWQFQ KSPAHATAFQ PEAKAWEKVS
LPHTPKLEPL LVNDQWQGIA LYQKQFNAPK SWQGQRLYLR FEGAMNHTKV WLNDKPVGEH
LGGYLPFSID ISAAVNYGAD NQLRVALDNN DNPITGPKPL HLLDFNTYGG LYRDVNLFIK
APLHISDEML TNLPNRGGLV ISSKIDDKAK ASVAVQADIR NQGSKAAQFT LKQVLEFDGK
VVATIAQSYT LAANSQQVFS QNLTVKQPKL WHPTHPNLYQ LQTELWQGNT LLERSSNKVG
IREFAFNAKH ELLINGEPYF LRGINRHQDY PHVGYATSKQ ADYRDAIKIK EAGFDYVRLS
HYPHSPAFMD AADEVGLVLI DAVLGWQYFS PEPEFAEHVY QSCRDLLRRD RNHASVLAWE
CSLNETPMPV AFIDNLKAII QAELPGAMSA GWQTQYDIYL QARQHRMQHY QTPTQPYNVS
EYGDWEYYAQ NAGLNQQAWA DLKDDERTSR QLLGAGEKRL LQQAMNLQEA HNDNLHTPAF
ADGYWVMFDY NRGYANDLES SGIMSIYRQP KFSYYLFQSQ RDPALTSTQY NAGPMVYIAS
DWQADSSPNV RVYSNADAVE LWLNGKLIAR QTPDNGANTD KLPHPPFTFH LPSFEAGELS
AKAFIGNQLV ATHSVRTPQA IHALEISLDT AGVPINSAGS DVLFVNVRLV DANGTTVPVN
DKVVSFEVNG VIQVLNPDAI VTEKGVASAL VRVHNGAKGA HLKASFAAEN TAAPLTAELK
F
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