Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3320 |
Symbol | |
ID | 5370851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3953273 |
End bp | 3954106 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640831579 |
Product | rare lipoprotein A |
Protein accession | YP_001367510 |
Protein GI | 153001829 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000103615 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCTAA AAAATAATCT TTTACAGCTT GCCGCCTTGG TTATGTGCTT CGCCCTTGCG GCGTGTTCTT CAAGCCCAAA CAACGCCAGC AAGAAAAACA TGGACCCGAA CAAGGGCCGT TATTCGCTGA AGAATGACAA GCTGCCGCTG AATCCACCGA ATGTGGATAA TGTGCCGAAC GCGACGCCTA AGTACGAGCC CTATAGCCGC CGTGGCAACA AGCCCTATAC GGTTTACGGC GAGTCTTATA CTGTGATGAA CACGGGCCAA GGCTTTAGTG AAACCGGACG CGCCTCTTGG TATGGAGAGA AATTCCATGG CTACGAGACC TCTAATGGCG AGCCCTATGA CATGTATTCC ATGTCGGGCG CCCATAAGAC ACTGCCACTG CCGAGTTACG CTCGGATCAC TAACTTAGAT AACAATAAGC AAGTGATCAT TCGCATCAAC GACCGCGGAC CATTCCACTC AGATCGTATT CTCGATGTCT CCTACGCCGC CGCCTATAAA CTCGGTATGC TCGGCAAAGG CACAGCACGG ATCAAACTGG ATGTGGTTTA TGTTGGCAGT GTTGCGGCCA CTAATTCTGG CGTAGTCAGC GCGCAAGATA CGGGCAATCA TTACATTCAG TTAGTTGCCT CCAAAGATAG GGCCAAACTC AATGCCATGG CGAAAGAGCT TGAACAGAAA TATCAGGTCA AGACCCGTGT ACAAGCGGCA AACAATATGT TTAGACTACA GCTCGGCCCC ATAGGCCAGC CAGAGTTAGC CGATAAGCTA CTCAATAACG TCAAGCAAAA CGGTTTTCCT GAGGGCTATA TCGTCCATGA ATAA
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Protein sequence | MPLKNNLLQL AALVMCFALA ACSSSPNNAS KKNMDPNKGR YSLKNDKLPL NPPNVDNVPN ATPKYEPYSR RGNKPYTVYG ESYTVMNTGQ GFSETGRASW YGEKFHGYET SNGEPYDMYS MSGAHKTLPL PSYARITNLD NNKQVIIRIN DRGPFHSDRI LDVSYAAAYK LGMLGKGTAR IKLDVVYVGS VAATNSGVVS AQDTGNHYIQ LVASKDRAKL NAMAKELEQK YQVKTRVQAA NNMFRLQLGP IGQPELADKL LNNVKQNGFP EGYIVHE
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