| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3319 |
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| Symbol | |
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| ID | 5370850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3952219 |
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| End bp | 3953289 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640831578 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_001367509 |
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| Protein GI | 153001828 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000245768 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACTC TCCGAGCTTT TCTAGCTCCA CTCGGTTTAC TGTGTTTTAG CTCATTGTTA
GTCGCCTGTA CCACGGCGAA CGAACCGACA TCTGCGCAGG CACCCGTTCC AAGCACGCCA
GTGGCTCCGG CCGCTGAAAT CGCGCCCACA ATTCCCGCTG AACTCAAAGA AGAGTTTATC
AAAGCTCAAA TAAAACAAGG TTTTACTCGT GCAGAAGTGC TCGCTTTTCT CGACAAGGCA
AAATACAACC AAGGGGTTAT CGATGCGATG ACCCGTCCAT GGGAAGCAAA ACCTTGGCAT
GTGTATTATC CAATTTTCTT AACGGAAAAA CGCCTTGAAG CTGGTCTCGC CTTTTGGAAA
AAACACGAGA AAACCATCGC AAAAGCCGCG GCCAAGTACA AAGTTGACCC ACAGATTATT
GTCGCCATTA TCGGCATTGA AACCTTCTAC GGCCAATACA CGGGCAATTA TCCCGTAATT
GATGCCCTCT ATACCTTAGG GTTTCACTAT CCGCCGCGCG CCACCTTTTT CCGTAAGGAA
TTTGGCGAGT TGATGAAGTT AGTGAAAGAA GAACATTTAG ATATAGATAC CCTCAAGGGC
TCCTACGCAG GCGCTATGGG TTATGGCCAG TTTATCCCAT CAAGTTACCG CCATTACGCG
GTTGATTTCG ATGGCAGCGG CAACCGCGAT TTATTACAAA GTCCTGAGGA TGCCATCGGC
AGTGTGGCCA ATTATTTCCA TGAACACGGT TGGCAAGCCA ATGCGCCGGT CGCTTTACCG
TTAGTGAATA ACAGCAAAAC TGCACCTAAA GCGAAAGTGT GGGCAGGTGA AAAGCTGAAC
TATAAAGTTG CAGATATTTT AACGCCGACC TTAGCCTTAG CCGATGCGCG GGACTTAGAT
GTTTCGCAAA AAGCCTTATT GATTGAGCTT GAACAAGCGG ATCACAGTGA CTACTGGCTT
GGCTTAAATA ACTTTTATGT GATCACTCGC TATAATCGTA GCCCTTTGTA TTCAATGGCC
GTTTATCAAT TTAGCCAACA ATTAAAAGAA CAGCATGCCT CTAAAAAATA A
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| Protein sequence | MPTLRAFLAP LGLLCFSSLL VACTTANEPT SAQAPVPSTP VAPAAEIAPT IPAELKEEFI
KAQIKQGFTR AEVLAFLDKA KYNQGVIDAM TRPWEAKPWH VYYPIFLTEK RLEAGLAFWK
KHEKTIAKAA AKYKVDPQII VAIIGIETFY GQYTGNYPVI DALYTLGFHY PPRATFFRKE
FGELMKLVKE EHLDIDTLKG SYAGAMGYGQ FIPSSYRHYA VDFDGSGNRD LLQSPEDAIG
SVANYFHEHG WQANAPVALP LVNNSKTAPK AKVWAGEKLN YKVADILTPT LALADARDLD
VSQKALLIEL EQADHSDYWL GLNNFYVITR YNRSPLYSMA VYQFSQQLKE QHASKK
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