Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3318 |
Symbol | |
ID | 5370770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3951096 |
End bp | 3952202 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831577 |
Product | rod shape-determining protein RodA |
Protein accession | YP_001367508 |
Protein GI | 153001827 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000382573 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACCC ATAGCCAATA TCAAAACATC TGGCAACGCT TGCACATAGA CTTGCCATTA TTGCTCGGCC TATTGGCTGT GATGGGCTTT GGCCTGTTCG TCATCTATTC TGCCAGCGGC GAAGATTTAG AGATGATGGA GCGGCAGCTG TTCCGTATGG TGTTGTCGCT CGGCATCATG TTCACTATGG CACAAATCAA TCCTGAGGCG CTTAAACGCT GGGCCTTACC CATTTATCTG GCGGGGATTG TCTTGCTGCT TGGGGTGCAC TTTTTCGGTG AAATCAACAA AGGCGCACAG CGCTGGTTGA ACTTAGGCTT TATGGAGTTT CAACCCTCAG AGCTGATTAA ACTCGCCTTC CCTATCACTA TGGCTTGGTA TATCAGTAAG TTCCCTCTGC CGCCGAAGAA ACGCTATCTT GCGGGTGCGG CGGTGATCTT GCTGGTGCCG ACTCTACTTA TCGCTAAACA ACCCGACCTT GGCACATCGA TTTTGGTGGC CGCATCGGGC ATTTTCGTGC TGTTTTTATC GGGCATGAGC TGGCTCATTG TTGGTGGCTT TATCGCCGCA GTGCTCGCCT TCCTGCCTAT CCTTTGGTAT TTCTTGATGC ACGATTACCA AAGAACACGG GTATTGACCC TGCTCGATCC TGAGCAAGAT CCCCTCGGCG CGGGTTATCA CATTATTCAG TCGAAAATCG CGATCGGCTC TGGCGGACTC TGGGGCAAAG GTTGGCTCGA CGGCACTCAG TCACAGCTTG AATTTATCCC TGAACGTCAT ACCGATTTTA TCTTTGCGGT GATCGGTGAA GAATTTGGCT TAATTGGCAG TATCTTACTG TTAATTATGT ACCTTTATAT TATTGGCCGC GGCTTAGTCA TCGCTTCACG CGCCCAAACC AGTTTTGCTC GACTGCTCGC CGGTAGTATC ACGCTGACCT TTTTCGTTTA TGTTTTTGTG AATATTGGCA TGGTTTCAGG TATCCTGCCC GTGGTAGGTG TACCACTGCC CCTTGTCAGT TATGGTGGAA CCTCCATGCT GACATTGATG ACAGGGTTTG GCATTCTTAT GAGCATTCAT ACCCATAGAC GTTTCGTAGA TAGATAA
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Protein sequence | MSTHSQYQNI WQRLHIDLPL LLGLLAVMGF GLFVIYSASG EDLEMMERQL FRMVLSLGIM FTMAQINPEA LKRWALPIYL AGIVLLLGVH FFGEINKGAQ RWLNLGFMEF QPSELIKLAF PITMAWYISK FPLPPKKRYL AGAAVILLVP TLLIAKQPDL GTSILVAASG IFVLFLSGMS WLIVGGFIAA VLAFLPILWY FLMHDYQRTR VLTLLDPEQD PLGAGYHIIQ SKIAIGSGGL WGKGWLDGTQ SQLEFIPERH TDFIFAVIGE EFGLIGSILL LIMYLYIIGR GLVIASRAQT SFARLLAGSI TLTFFVYVFV NIGMVSGILP VVGVPLPLVS YGGTSMLTLM TGFGILMSIH THRRFVDR
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