Gene Shew185_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3318 
Symbol 
ID5370770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3951096 
End bp3952202 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content49% 
IMG OID640831577 
Productrod shape-determining protein RodA 
Protein accessionYP_001367508 
Protein GI153001827 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000382573 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACCC ATAGCCAATA TCAAAACATC TGGCAACGCT TGCACATAGA CTTGCCATTA 
TTGCTCGGCC TATTGGCTGT GATGGGCTTT GGCCTGTTCG TCATCTATTC TGCCAGCGGC
GAAGATTTAG AGATGATGGA GCGGCAGCTG TTCCGTATGG TGTTGTCGCT CGGCATCATG
TTCACTATGG CACAAATCAA TCCTGAGGCG CTTAAACGCT GGGCCTTACC CATTTATCTG
GCGGGGATTG TCTTGCTGCT TGGGGTGCAC TTTTTCGGTG AAATCAACAA AGGCGCACAG
CGCTGGTTGA ACTTAGGCTT TATGGAGTTT CAACCCTCAG AGCTGATTAA ACTCGCCTTC
CCTATCACTA TGGCTTGGTA TATCAGTAAG TTCCCTCTGC CGCCGAAGAA ACGCTATCTT
GCGGGTGCGG CGGTGATCTT GCTGGTGCCG ACTCTACTTA TCGCTAAACA ACCCGACCTT
GGCACATCGA TTTTGGTGGC CGCATCGGGC ATTTTCGTGC TGTTTTTATC GGGCATGAGC
TGGCTCATTG TTGGTGGCTT TATCGCCGCA GTGCTCGCCT TCCTGCCTAT CCTTTGGTAT
TTCTTGATGC ACGATTACCA AAGAACACGG GTATTGACCC TGCTCGATCC TGAGCAAGAT
CCCCTCGGCG CGGGTTATCA CATTATTCAG TCGAAAATCG CGATCGGCTC TGGCGGACTC
TGGGGCAAAG GTTGGCTCGA CGGCACTCAG TCACAGCTTG AATTTATCCC TGAACGTCAT
ACCGATTTTA TCTTTGCGGT GATCGGTGAA GAATTTGGCT TAATTGGCAG TATCTTACTG
TTAATTATGT ACCTTTATAT TATTGGCCGC GGCTTAGTCA TCGCTTCACG CGCCCAAACC
AGTTTTGCTC GACTGCTCGC CGGTAGTATC ACGCTGACCT TTTTCGTTTA TGTTTTTGTG
AATATTGGCA TGGTTTCAGG TATCCTGCCC GTGGTAGGTG TACCACTGCC CCTTGTCAGT
TATGGTGGAA CCTCCATGCT GACATTGATG ACAGGGTTTG GCATTCTTAT GAGCATTCAT
ACCCATAGAC GTTTCGTAGA TAGATAA
 
Protein sequence
MSTHSQYQNI WQRLHIDLPL LLGLLAVMGF GLFVIYSASG EDLEMMERQL FRMVLSLGIM 
FTMAQINPEA LKRWALPIYL AGIVLLLGVH FFGEINKGAQ RWLNLGFMEF QPSELIKLAF
PITMAWYISK FPLPPKKRYL AGAAVILLVP TLLIAKQPDL GTSILVAASG IFVLFLSGMS
WLIVGGFIAA VLAFLPILWY FLMHDYQRTR VLTLLDPEQD PLGAGYHIIQ SKIAIGSGGL
WGKGWLDGTQ SQLEFIPERH TDFIFAVIGE EFGLIGSILL LIMYLYIIGR GLVIASRAQT
SFARLLAGSI TLTFFVYVFV NIGMVSGILP VVGVPLPLVS YGGTSMLTLM TGFGILMSIH
THRRFVDR