Gene Shew185_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3296 
Symbol 
ID5372199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp3927638 
End bp3928150 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content49% 
IMG OID640831548 
Productlysozyme 
Protein accessionYP_001367486 
Protein GI153001805 
COG category[S] Function unknown 
COG ID[COG3656] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0400894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCATC TTATTCGTAC CATTGCGGTG AGTGCTTTGT TTGTGAGTTC AGCTGCGTTT 
GCGGCGCCAC AAATGACCGT CGATTTAACT TTACCTGAAA TTACCGAAGG CCAATACCAC 
AGACCCTATG TGGCCGTGTG GGTTGAAAAT ACCCAAGGGC AACCGGTAAA AACCTTAAGC 
CTTTGGGTTT GGGATGAAGG CCATAAATGG CTTAAAGACA TCCGTCGTTG GTGGCGTAAA 
GCGGGTCGTG ACGATATGAG TTTTGTTGAT GGTATTGCAT CAGCCACACG TCCTGCAGGT 
CATTATAAAA TCGATTGGGA TTTAAAAGAT GAGGCAGGCA AAGTGCTGGA ACCTGCTCGT 
TACACTGTGT TTATTGAAGT GGTGCGTGAG CATGGCGGCC GCGATCTCGT GCGACAAAAC 
ATCGATTTAG CTGCGGGGGA CTTCTCAGTG CAGTTACCCG CCACCACTGA AACCGGCGTT 
ATCGACATAC GCTTAAGTGG CATGGCTCGC TGA
 
Protein sequence
MRHLIRTIAV SALFVSSAAF AAPQMTVDLT LPEITEGQYH RPYVAVWVEN TQGQPVKTLS 
LWVWDEGHKW LKDIRRWWRK AGRDDMSFVD GIASATRPAG HYKIDWDLKD EAGKVLEPAR 
YTVFIEVVRE HGGRDLVRQN IDLAAGDFSV QLPATTETGV IDIRLSGMAR