Gene Shew185_3294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3294 
Symbol 
ID5371669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp3925921 
End bp3926397 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content44% 
IMG OID640831546 
Producttranscription elongation factor GreA 
Protein accessionYP_001367484 
Protein GI153001803 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00887513 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAGG TTCCTATGAC AGTTGTCGGT GCAGAACAGC TGCGTAAAGA GTTAGATATT 
CTCAAGTTTG ACCGTCGCCC TAAGATCACT GAAGCGATTG CCTCTGCGAG AGAGCTAGGC 
GACCTGAAAG AAAACGCGGA ATACCATGCG GCTCGTGAAG ACCAAGGTAT TTGTGAAGCA 
CGTATCCGTG ATATTGAAGG TAAGTTATCT AACGCGCAAA TTATCGACGT CACTAAGATG 
GTGAACAACG GTCGTATTAT TTTTGGCGCC ACTGTGACTA TTTTAAATCT CGATACTGAC 
GTTGAAGTGA CTTATCGCAT AGTCGGCGAT GATGAAGCGA ATATTAAAGA AAACCTGATT 
TCAGTGAACT CACCGATAGC CCGTGGCTTA GTGGGTAAAA ATGAAGGTGA TGAAGTGTCG 
ATTACCACGC CAGGTGGCAT GACTGATTAC GAAATCATCT CAGTACAGTA TTTATAA
 
Protein sequence
MTKVPMTVVG AEQLRKELDI LKFDRRPKIT EAIASARELG DLKENAEYHA AREDQGICEA 
RIRDIEGKLS NAQIIDVTKM VNNGRIIFGA TVTILNLDTD VEVTYRIVGD DEANIKENLI 
SVNSPIARGL VGKNEGDEVS ITTPGGMTDY EIISVQYL