Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3290 |
Symbol | |
ID | 5371817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3921553 |
End bp | 3921852 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640831542 |
Product | hypothetical protein |
Protein accession | YP_001367480 |
Protein GI | 153001799 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein |
TIGRFAM ID | [TIGR00253] putative RNA-binding protein, YhbY family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000365798 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTTAA CAACCAAACA AAAACAGCAT TTAAAAGGTC TAGCGCATCC GCTAAAGCCA GTGGTGCTGC TTGGTGCCAA TGGATTGACT GAAGGTGTAC TCGCTGAAAT TGAAAGCGCA CTCGCTTATC ATGAATTGAT TAAAGTGAAA GTAGCCTCTG CCGACAGAGA GCTAAAAAAT GCCATCGTTG ATGCCATAGT ACGTGAAACT CAATCCGCAA AAGTGCAACT TATTGGTCAT ATTCTGGTGA TTTATCGTCA ATCACCAGAA ATGAAGATTG CTTTGCCAAA GGCAAAGTAA
|
Protein sequence | MNLTTKQKQH LKGLAHPLKP VVLLGANGLT EGVLAEIESA LAYHELIKVK VASADRELKN AIVDAIVRET QSAKVQLIGH ILVIYRQSPE MKIALPKAK
|
| |