Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3288 |
Symbol | |
ID | 5372649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3918830 |
End bp | 3920803 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640831540 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001367478 |
Protein GI | 153001797 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000787677 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGTCTA GTAATTTGAG TGACATGGCA AAAAATCTAA TACTCTGGGT TGTCATCGCC GTTGTGCTGA TGTCAGTGTT TCAGGGTTAC TCCCCCTCTT CTTCGTCATC GCAGAAGATG GATTATTCTA CCTTCTTAGA TAATGTCCGT GATGGGCAGG TCGCAACTGT TGAAGTTAAA AGCGACCAAC GTACTATTGA AGGTGCTAAG CGAACGGGTG AAAAGTTCAC GACTATCATG CCGTTATATG ACCAAGATTT AATTAATGAT CTTGATCGTA AGGGCATCAC CATGAAGGGC CAAGAAGCCG AAGAATCTGG GTTCCTAACC CAAATTTTCA TCTCTTGGTT CCCTATGTTA TTGCTTATCG GGGTATGGAT TTTCTTCATG CGCCAGATGC AAGGCGGCGG TGGCAAAGGC GCGATGTCCT TTGGTAAGAG CAAAGCCAAG CTGATGAGCG AAGATCAGAT TAAAACCACG TTTGCCGATG TTGCTGGTTG TGACGAAGCA AAAGAAGAAG TGAAAGAGTT AGTTGATTAT CTGCGTGACC CAACTAAATT CCAAAAATTG GGCGGCCGTA TTCCAACGGG CGTGCTTATG GTGGGTCCTC CAGGTACAGG TAAAACCTTG CTGGCGAAAG CCATTGCGGG TGAATCTAAA GTACCTTTCT TCACTATCTC GGGTTCTGAT TTCGTTGAAA TGTTCGTTGG TGTTGGTGCA TCCCGTGTGC GTGACATGTT CGAACAAGCG AAAAAGTCTG CACCTTGTAT TATCTTTATC GATGAAATCG ATGCGGTCGG TCGTCAACGC GGCGCGGGTT TAGGTGGTGG TCATGATGAA CGTGAGCAAA CACTGAACCA AATGCTGGTT GAGATGGATG GCTTCGAAGG TAATGAAGGC GTTATCGTTA TCGCGGCAAC TAACCGTCCA GACGTACTCG ATTCTGCACT GCTGCGTCCA GGTCGTTTTG ACCGTCAAGT GGTCGTTGGC TTACCAGACG TGCGTGGTCG TGAGCAGATT TTGAAAGTGC ATATGCGTAA AGTGCCGCTT TCTGAAGATG TGAAAGCGAG TGTGATTGCC CGTGGTACAC CAGGTTTCTC TGGTGCTGAC TTAGCTAACT TAGTGAACGA AGCGGCTCTG TTTGCGGCTC GTGGAAATCG CCGAGTTGTG GGCATGGAAG AATTTGAGCG TGCAAAAGAT AAAATCATGA TGGGTGCTGA GCGCCGTTCT ATGGTGATGT CTGAAGCTGA AAAAGAAATG ACTGCATACC ACGAAGCGGG CCATGCAATT GTAGGTTGTT TAGTACCAGA GCACGATCCT GTGCACAAGG TCACTATCAT TCCTCGCGGC CGTGCGCTGG GTGTCACTTT CTTCTTACCC GAAGCGGACT CAGTGAGTCA GAGCCGTCGT AAGTTAGAAA GCCAAATTTC AGTCGCTTAC GGTGGTCGTT TAGCTGAAGA GCTTATCTAC GGTACTGAAA AAGTGTCAAC TGGCGCATCA CAGGACATCA AATACGCGAC CTCTATTGCG CGTAACATGG TGACTCAGTG GGGCTTCTCG GACAAGCTAG GTCCATTATT GTATGCCGAA GAAGACGGTG AAGTGTTCTT AGGTCGCAGC ATGGGTAAAG CCAAAGCCAT GTCCGATGAA ACTGCAACTA TCATCGACGC GGAAGTGAAA GTCTTTATCG ACAAGAACTA CGCGAGAGCG AGACAGATAT TGACCGATAA CCTCGATATT CTGCACTCGA TGAAAGAAGC TCTAATGAAG TATGAAACCA TTGATTCACT TCAAATTGAC GATTTAATGA AGCGTCGTGA AGTGCGCCAA CCTGCCGATT GGCAAGTGGA TGACCATGGT TCTAACGACA AAGGCAGCGG TCATGGTGAG CCAGCTGAAA AAGCTGAAGA TACTGTGACT ACAGCGTCTG CTGAACCAGA CTTGAAAGAG CCTGATGAAT CACCTGCTAA GTAA
|
Protein sequence | MRSSNLSDMA KNLILWVVIA VVLMSVFQGY SPSSSSSQKM DYSTFLDNVR DGQVATVEVK SDQRTIEGAK RTGEKFTTIM PLYDQDLIND LDRKGITMKG QEAEESGFLT QIFISWFPML LLIGVWIFFM RQMQGGGGKG AMSFGKSKAK LMSEDQIKTT FADVAGCDEA KEEVKELVDY LRDPTKFQKL GGRIPTGVLM VGPPGTGKTL LAKAIAGESK VPFFTISGSD FVEMFVGVGA SRVRDMFEQA KKSAPCIIFI DEIDAVGRQR GAGLGGGHDE REQTLNQMLV EMDGFEGNEG VIVIAATNRP DVLDSALLRP GRFDRQVVVG LPDVRGREQI LKVHMRKVPL SEDVKASVIA RGTPGFSGAD LANLVNEAAL FAARGNRRVV GMEEFERAKD KIMMGAERRS MVMSEAEKEM TAYHEAGHAI VGCLVPEHDP VHKVTIIPRG RALGVTFFLP EADSVSQSRR KLESQISVAY GGRLAEELIY GTEKVSTGAS QDIKYATSIA RNMVTQWGFS DKLGPLLYAE EDGEVFLGRS MGKAKAMSDE TATIIDAEVK VFIDKNYARA RQILTDNLDI LHSMKEALMK YETIDSLQID DLMKRREVRQ PADWQVDDHG SNDKGSGHGE PAEKAEDTVT TASAEPDLKE PDESPAK
|
| |