| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3282 |
|---|
| Symbol | |
|---|
| ID | 5369986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 3913889 |
|---|
| End bp | 3914344 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640831532 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001367472 |
|---|
| Protein GI | 153001791 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000111408 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAACGT TAGAATTCAG ACTGGCAGAA ATGCTCAAAG TACCTGTGGA AGCATTAGGC
TTTCAGCTAT GGGGCATTGA ATATGTTCAA GCGGGTAAGC ATTCCACACT GCGAGTGTTC
ATTGATGGTG AGAATGGTAT CAATATTGAA GATTGTGCCA ATGCAAGTCG CCAAGTCAGT
GCTGTACTCG ATGTTGAAGA TCCTATTTCT ACAGAATATA CCCTAGAGGT TTCTTCGCCA
GGCGTTGATA GACCCTTATT TACTGCTGAG CAGTATGCGG GCTATGTGGG CGAGGATGTA
AAGCTTCAAT TGACTATGCC GGTTGACGGC AGTCGTAATT TAAAAGGCGC CATCACTGCG
GTCGACGGGC AAATGCTCTC ACTGAAAGTG AATGGTAAAG AGTTAGTTGT CGCATTGGAT
AATATCCGCA AAGGCAACTT AATCGCTAAG TTTTGA
|
|---|
| Protein sequence | MATLEFRLAE MLKVPVEALG FQLWGIEYVQ AGKHSTLRVF IDGENGINIE DCANASRQVS
AVLDVEDPIS TEYTLEVSSP GVDRPLFTAE QYAGYVGEDV KLQLTMPVDG SRNLKGAITA
VDGQMLSLKV NGKELVVALD NIRKGNLIAK F
|
|---|
| |