Gene Shew185_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3279 
SymbolrbfA 
ID5371631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp3909176 
End bp3909649 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID640831529 
Productribosome-binding factor A 
Protein accessionYP_001367469 
Protein GI153001788 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.470781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAGAA ATATTATGGC AAAAGAATTC AGTCGTACTC GTCGAATCGC TCAGCAGCTT 
CAGCAAGAAC TTGCTCAAGT GCTACAGCGC GACATGAAAG ATCCTCGTAT TGGCTTTGTA 
ACCGTGAATG ACGTCGATGT CTCACGCGAC CTTAGCTATG CCAAAGTCTT CGTGACTTTC 
TTCGAGGAAG ACAAAGCCGT TGTTCAAGAA AAGCTAAACG CTTTGATCAG CGCCGCTCCT 
TATATCCGCA CTTTAGTGGC GGGCCGTATG AAGCTGCGTG TGATGCCTGA ACTGCGTTTT 
ATCTATGATA GCTCGCTAGT TGAAGGTATG CGCATGTCTA ACTTAGTTAG CCAAGTGATC 
AACCAAGACA AAGCGAAGCA GCAGCAATTT GGCAGCGAAG ACGCATCGGT TGAAGATGAA 
GTCTTAGGTG ATGATGTTGC CGATGATGCT GATGAAACGG AAGGTAAAGA TTAA
 
Protein sequence
MVRNIMAKEF SRTRRIAQQL QQELAQVLQR DMKDPRIGFV TVNDVDVSRD LSYAKVFVTF 
FEEDKAVVQE KLNALISAAP YIRTLVAGRM KLRVMPELRF IYDSSLVEGM RMSNLVSQVI 
NQDKAKQQQF GSEDASVEDE VLGDDVADDA DETEGKD