| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3278 |
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| Symbol | truB |
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| ID | 5371630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3908211 |
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| End bp | 3909176 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640831528 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001367468 |
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| Protein GI | 153001787 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.922634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGTC GTCCAAAAGG TCGTTTTATT GATGGGATAG TGCTGCTGGA TAAATCCACG
GGCATGAGTT CTAACTTTGC ATTGCAAAGG GTAAAGCGCT TTTTTAATGC GAACAAAGCA
GGGCATACGG GCGCACTCGA TCCGTTAGCG ACAGGTATGT TACCTGTGTG CTTAGGCGAA
GGGACTAAGT TTTCCCAGCA TCTGTTAGAT GCCGATAAAC GTTATTTGGT CACCGCAAAG
CTGGGCGAGC GAACGGATAC CAGTGATTCC GATGGCGAAG TGGTGCAAAC CCGCGCCATT
GATTTTACTG AAGCGCAGTT ATTAACCGCG CTTGATTTCT TCCGTGGTGA GACTCAGCAA
GTGCCTTCTA TGTATTCCGC GCTTAAATAT CAGGGCCAGC CCCTGTATAA ATATGCCCGT
GAAGGCATTG AAGTGCCGCG CGAATCTCGC CCTATTACGG TATTTGAGCT TAATTTCATC
GGTCTTGAAG GCGATGAGCT GACCTTAGAC ATTCATTGTT CTAAGGGCAC TTATATTCGC
ACTATCATAG ACGATCTCGG TGAAATGCTC GGTTGTGGCG CCCATGTCAT CATGTTGCGT
CGCACTCAAG TTGCACAATA TCCCTATGCA AGAATGGTTT CCTTAGAACA ACTTGAAGCG
CTTGTTGCTC AAGCACATGA ACAACAGATA GATCCGAGTG TACTTCTTGA TCCGCTGTTA
TTACCTATGG ATACGGCTGT GGCCGATTTC CCTGAGGTGA ATGTGCCGGA TGCAATCGCC
CCTTACTTAA TGCAAGGTCA GGCTGTTCGG GTCCCTGTTA ATGCAGACTT GAAAACCGAT
GAACTGGTGC GTATCACTTT AGGTGACATT CGCCGATTTG TGGGGATTGG CACTATGAAC
GAAGACGGCC TACTCGCGCC GAAACGACTC ATAGTGATCC ATGACGAGCC AGCAGAAACT
GATTAG
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| Protein sequence | MARRPKGRFI DGIVLLDKST GMSSNFALQR VKRFFNANKA GHTGALDPLA TGMLPVCLGE
GTKFSQHLLD ADKRYLVTAK LGERTDTSDS DGEVVQTRAI DFTEAQLLTA LDFFRGETQQ
VPSMYSALKY QGQPLYKYAR EGIEVPRESR PITVFELNFI GLEGDELTLD IHCSKGTYIR
TIIDDLGEML GCGAHVIMLR RTQVAQYPYA RMVSLEQLEA LVAQAHEQQI DPSVLLDPLL
LPMDTAVADF PEVNVPDAIA PYLMQGQAVR VPVNADLKTD ELVRITLGDI RRFVGIGTMN
EDGLLAPKRL IVIHDEPAET D
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