Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3273 |
Symbol | |
ID | 5369954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3900609 |
End bp | 3901814 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640831523 |
Product | phage integrase family protein |
Protein accession | YP_001367463 |
Protein GI | 153001782 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0956673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTTAT CTGACACATG GTTAAAGGCT AATTTATCTA AAAGTTACCC CAAGTCTTTT GAACGCGCAG ACCGTGATGG CTTGAGTGTT AGGGTGTCTC CGAAAGGTAA GATTACTTTC CAAATCAGAT ACCGCTATGT TGGAAAAGCC TGCCGAGTTG ACTTAGGCTC TTACCCACTT ATGTCACTTA AGGATGCAAG AACTGAATGC GTTAGATTGC GTGCAGAGCT TGAGCAAGGC AATAACCCGA AGACCGTAAA ACAACTTGAG CACAAAGCCG TTTCTACAGC GCTAACAATG TCTGAGTTGT TCATGCAGTG GTATGAGAGT TATTGTGTGG TCAATAAAAC CAGTCACGCT GAAATTTTAA GATCCTTCAA ATTACACGTT CTGCCAAAGA TAGGTCACTT GCCTGCAGAT AAAGTCTCGC TACATATTTG GCTTGATGTT ATCGAGACCA AAGCAAAAAC CTCACCTTCA ATTGCCGATA GATTACTCAC AAATGGAAAG CAGTTACTTA AGTGGGGAGT CAAGCGCCAA TTACTTAAGT CAAACGTGTT GGTTGATATC AGCGCCAAGA GTGACCTACA AATAACTAAG AATGTGGGTG ATCGCTCACT TAACAATGAT GAAATTCGGT TGTTTTGGTT AGCGATAGAA GGGTCCAGAA TTGCACAAAA AAATAAAATC TTTCTCAAGC TCAATCTTAT CTATGGTTGC CGTAATGGTG AATTGAGGCT AAGCAGAAAA TCAGACTTTG ACTTCAATAC TATGGTGTGG ACTGTACCTC CTGAAAATCA TAAAACAGGT AAGGTAACTA AAAAACCATT GCTCAGGCCA ATCATTCCAG AGACAAAAGA GTTGATTGAA GAAGCCGTGC TTTTGAGTGG TGACGGTGAT TTTTTATTTA ATAATGAAGG CACAGATCAG CCAATGGGGC GTTCTTCATC GCTTTCTCTG CCATATAACA TTATCCAATG GCTTAAGAAG AACATGAGCT ATGAAATGGA ACACTGGTCA ATACACGATT TGCGTAAAAC GGCCCGGACA AACTTTTCAA CTTTAACTGA GCCGCATGTC GCCGAGATCA TGTTGGGCCA TAAACTGCCA GGGCAATGGC AAGTTTATGA CCACTATGAA TATCTAGAGG AACAAGCTAA CGCATATAGC GGATGGGTAG AAAGACTACG TAAAATCACT GCCTAG
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Protein sequence | MSLSDTWLKA NLSKSYPKSF ERADRDGLSV RVSPKGKITF QIRYRYVGKA CRVDLGSYPL MSLKDARTEC VRLRAELEQG NNPKTVKQLE HKAVSTALTM SELFMQWYES YCVVNKTSHA EILRSFKLHV LPKIGHLPAD KVSLHIWLDV IETKAKTSPS IADRLLTNGK QLLKWGVKRQ LLKSNVLVDI SAKSDLQITK NVGDRSLNND EIRLFWLAIE GSRIAQKNKI FLKLNLIYGC RNGELRLSRK SDFDFNTMVW TVPPENHKTG KVTKKPLLRP IIPETKELIE EAVLLSGDGD FLFNNEGTDQ PMGRSSSLSL PYNIIQWLKK NMSYEMEHWS IHDLRKTART NFSTLTEPHV AEIMLGHKLP GQWQVYDHYE YLEEQANAYS GWVERLRKIT A
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