Gene Shew185_3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3245 
Symbol 
ID5372211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3882231 
End bp3883046 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content45% 
IMG OID640831495 
Producthypothetical protein 
Protein accessionYP_001367435 
Protein GI153001754 
COG category[V] Defense mechanisms 
COG ID[COG3440] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTAGTTA ACCAAGTTGA ACGTGCCGCT CGTGCTTGGC CAGTTCTTAT CAACCGTGCA 
CGCAAAAAAT CTACAATTAC TTATGGCGAA CTAGGTCATG CCATTGGAGT ACATCATCGA
GCAGTGAGAT ACGTACTGGG CGTAATCCAA GACTATTGTC TAGAAGTGAA TCTCCCCCCT
CTCACTATTC TCATCGTGAA TTCCTCTGGG CTTCCTGGAA GCGGGTTTAT TGCCTTTGAT
CTAGATAGCT TCGATGAGGG TCTGCAGAAG GTTTACGATT TCGATTGGGA AAGTATAACA
AACCCATTTG GTTTCTCAGA GTCTGGAGAT TCTTACGAAT CAATCATTGC GGAGCTCATC
CACGATCCCT CCTCCGCAGG AGACGTATAC ACCCGTATAA AGGCAAGAGG CGTTAAGCAA
ATTCTCTTTC GTGAGGCCTT GCTCAAAGCA TATTCTCGTC GTTGTGCATT CACAGACATT
TCTGCTTTAG TAACGCTTGA GGCTTGCCAT ATAGTGCCTT GGTCTCAAGC ATCTAATGCT
GAAAGGCTTG ATGTAAGAAA TGGCCTGTTG CTCAACAGCT TTCATCACAA GTTATTCGAC
CGAGGCCATA TCACGTTAAA TACCGATCAC CGAATTGTGT ACTACGACCC TCATGGGGAA
GAAAAAAAAT ACTCAGATCT TGAGCTCCAG CTAACCGCAG GACTGCATGG GAAATTAATC
CATGTGCCCC ACAAGCTTGA GCTTAGGCCT TCAGTTGAAT GTATTGCCAA GCATCATCAA
CTAGCAGGGT GGGAGATTGA AGAACTTGAT ATATAA
 
Protein sequence
MVVNQVERAA RAWPVLINRA RKKSTITYGE LGHAIGVHHR AVRYVLGVIQ DYCLEVNLPP 
LTILIVNSSG LPGSGFIAFD LDSFDEGLQK VYDFDWESIT NPFGFSESGD SYESIIAELI
HDPSSAGDVY TRIKARGVKQ ILFREALLKA YSRRCAFTDI SALVTLEACH IVPWSQASNA
ERLDVRNGLL LNSFHHKLFD RGHITLNTDH RIVYYDPHGE EKKYSDLELQ LTAGLHGKLI
HVPHKLELRP SVECIAKHHQ LAGWEIEELD I