Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3240 |
Symbol | |
ID | 5370122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3869904 |
End bp | 3873284 |
Gene Length | 3381 bp |
Protein Length | 1126 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640831490 |
Product | CRISPR-associated helicase Cas3 family protein |
Protein accession | YP_001367430 |
Protein GI | 153001749 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR02562] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGTGA CTTTTATCAG TCAGTGCGAG AAAAATGCCC TGAAAAAGAC CCGCCGCGTA CTTGATGCTT TCGCCAATCG CATAGGTGAT AACACTTGGC AAACTCTGAT CACGGAAGAT GGGCTGTTAA CGGTTAAGAA AATGCTCAAA CAAACTGCAA GTCGAAGTAC TGCAGTGAGT TGCCACTGGA TCCGCTCACG TTCTAGAACT CAGCTCTTGT GGATCGTGGG AAATCGATTG AAATTTAATG AACAAGGCAT AGTGCCGGTG AATCGCACTC AGCTTAATTT GGAACATAAA GAATGGGAGC AGGGTTGGCA TTTAAATGAA GTAATTGTCC TTGCGTCGAG TATTGCTGGA TTATTTCATG ATTTTGGAAA AGCGAATGAT TTATTTCAGT TAAAGCTTAA AGGGTTAACC GAGTCTAAGG GGGAGCCCTA TCGGCATGAG TGGGTGTCCC TGCGATTATT TGAAGCCTTT GCTAATGGTT TAGCGGATAA GGATTGGCTG GAGAAATTGG CCAACATTGA TAAAAACAGT ACTGAAATAG AACAGCAGGT TTTGTCTAGG CTGTTTAAAG AAGACTCCGG ATATCAGCGA CCTTTTGATC AACTTGCACC ATTTGCCAAA TTGGTGGCTT GGTTGATTGT ATCGCACCAC CGACTTCCGC TCGCCCATGT AGGTAGCGTA CATACAAAGG AAATAGACAG CTGGCTCTCT CATTGTTTTA GTTGCCATTG GAATTCAGCG AATGCAGAAA ACATGACGGC AATAGATACG GATCTTATCA GGCAAAATTG GCAGTTTAGT CAAGGTACGC CACTCTTAAG TCGGCCTTGG CAGCATAAAG CCCGAAACTT AGCCGAACGT GCGCTGAATT GTCCATTGAT ATTTACTGAA CAAGTTTGGC TTGAGCAACG CTTTGTTGGA CATATGGCGC GCTTGTCGTT GATGCTCGCC GATCATTATT ATTCCTCTCT TCTCGCTGAA AAATCTAAAG TTCAGTGGCG AGATAAAACT TACAACGCCT TTGCTAATAC TGATCATAAA AGATTGCCAC AGGCGGGTAA TGCGTTAAAG CAACAGCTTG ATGAGCATAA TATTGGTGTG GCGGTGAATG CCCAGCGCTT TGCACAAAAC TTACCTGCTT TAAAATATAC TTTACCAGCG ATTGCCCAAC ATAAGTTATT TAGTCAGAAC GCGACAAACG CCAAGTATCG CTGGCAAGAT AAGGCTTTTG CTCAAGCTAA GTTGATAGCT AAAGGCAGCG AGAGACAAGG TTTTTTCGGG GTCAATATGG CCTCAACCGG ATGCGGGAAA ACCATAGCCA ATGCCCGCAT TATGTATGGT TTAGCAGATG AACGAGAAGG TTGCCGTTTT TCAGTCGCAC TAGGTTTACG AACGCTTACC TTACAAACGG GTGATGCTTA TCGGGATTTA CTTAAACTTG GGGATGATGA GCTAGCGGTA CTGATTGGTT CACAGGCCGT TAGCACCTTA CATCAACTGA ACAATGCAAC ACCGCAGCAT AAGCAGATTG GTAGTGAGTC GGCAGAGGAT CTTTTCGAAC AATTATTTAT TAGTTATCAA GGTCAAATTT ATGATGGGCG GTTAAAGCAC TGGCTTGCTG CGAGTCCTAA ATTGGAGCAA TTAGTGAGTG CGCCCATTTT GGTTAGCACC ATTGATCATC TAATGCCTGC AACTGAAAGC TTGCGAGGAG GTAAACAAAT TGCGCCTATG TTGCGATTAC TCACCTCTGA TTTAATTTTA GATGAGCCGG ATGATTTTGG ACTTGAGGAC TTACCCGCAC TATGTCGCTT AGTGAACTGG GCAGGCATGT TAGGTTCTAG AGTTTTACTG TCATCAGCGA CACTGCCGCC ATCGTTGATC AAAACACTAT TTGATGCCTA TCATGCTGGC CGCCAGCATT TTAATCAGGC GCATTTCGCC ACGACCGAAC AGCCTCCAAT CTGGTGTGCT TGGTTTGATG AATATAAAAG TGAAACTTTA GAGATATCCA ACTCAAGATC TTATATTGAG CAACATAAAA TTTTTGTGAG TAAAAGAGTT AAAAAGCTCG CTTGCCAACA AGTCGTCCGT AGGGGAGAGC TGGTAAAGCT TGAATTAGCA TCGCCAACCA CCTTTGATGA GTGTGTTGCC GCCACGCTAC ACAGATGTCT ACACCAGCTA CATGATATGC ACCATGTTGT ACATCCATCA GGGCGTAAGG TGTCTTTAGG TGTTGTGCGT ATGGCTAATA TTAATCCAAT GATCGCTGTT GCTAAGTTAC TGATTAACAT GTCACCGCAA GCCGATTACA GTATCCATTA CTGTGTTTAC CATTCGCAGT TTCCATTAGC ACATCGCTCT TACAAAGAAA GTCGCCTCGA TAACGCCTTA TCACGTCACG ATGAAGCCAA TTTGTGGCGC CAGCCTGAAA TTCAGCAGGC ATTATCAATG ACCAATACTT CGAATAATAT TTTCATCGTG TTAGGCACTT CAGTCGTTGA AGTGGGGCGC GATCATGACT ATGACTGGGC GATTGCTGAA CCTAGTTCAT TGCGAGCTTT AATCCAACTT GCAGGACGTA TTCAACGTCA TCGTCAGCAG GTACCTAAGA CGGCTAATTT ATTAGTTTTA AATAAAAATA TTCGGGCACT AAAAAATGAG CATCCAGCGT ACTGTAAGCC AGGGTTTGAA AGTGCCGCTT TACCCTTACT ACAACATGAT TTAACCCAAT TACTGACTAC TGAACTCGAT GCCATTTCGG CAATTCCAAG AATTATGGAG CCTGTGCCCA GTGCTAATGG CAGTGAATTT CAATATAGCG ATCTGCACAA AAAACAACAT GCTCAGGCAG TAAACTCCTT TTGGGGGCAG GAACATCGTG CTTTGCAACT GGCGTTAGGA CCTGTTGGCA AAGACAAAGC TGGAGTCATT TTTTATCGCA GTTATAAAGA GGCCAATCTG TGGTGGAAGC ATGATGTTGC TTGGAGTGGG GAGTTTATTC GCCAAACCGC ATTTCGCCAA TCGCAACCCC AAGAGGCATT TTTATTGCGA TTACCAGAAG ATGAAATATT AACCTGGTGT CAATTAGATA CCACACATAA ACCCTATCAA TATCCCACGT TAAACCATCG TTTTAACTCT GAAATAGTCC CGTTAGCTAA AGGATGTTTC TGGTGGTTTA AACCATCGAC CGAACAAATA TATCAAGACT TGGCTGACTT ACTGGACAGT TCGATCACTA AAGTGAGTGA GCAATTTGGT GAGATTAACC TTCGAATGGC AAATAAAGAT CAACCCGCCC TAGTGTGGGC ATGGCACGAA CAACTTGGTG TGTACGAATG TAAAGACAAT AAGGACAGCC CATGGAATTA A
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Protein sequence | MMVTFISQCE KNALKKTRRV LDAFANRIGD NTWQTLITED GLLTVKKMLK QTASRSTAVS CHWIRSRSRT QLLWIVGNRL KFNEQGIVPV NRTQLNLEHK EWEQGWHLNE VIVLASSIAG LFHDFGKAND LFQLKLKGLT ESKGEPYRHE WVSLRLFEAF ANGLADKDWL EKLANIDKNS TEIEQQVLSR LFKEDSGYQR PFDQLAPFAK LVAWLIVSHH RLPLAHVGSV HTKEIDSWLS HCFSCHWNSA NAENMTAIDT DLIRQNWQFS QGTPLLSRPW QHKARNLAER ALNCPLIFTE QVWLEQRFVG HMARLSLMLA DHYYSSLLAE KSKVQWRDKT YNAFANTDHK RLPQAGNALK QQLDEHNIGV AVNAQRFAQN LPALKYTLPA IAQHKLFSQN ATNAKYRWQD KAFAQAKLIA KGSERQGFFG VNMASTGCGK TIANARIMYG LADEREGCRF SVALGLRTLT LQTGDAYRDL LKLGDDELAV LIGSQAVSTL HQLNNATPQH KQIGSESAED LFEQLFISYQ GQIYDGRLKH WLAASPKLEQ LVSAPILVST IDHLMPATES LRGGKQIAPM LRLLTSDLIL DEPDDFGLED LPALCRLVNW AGMLGSRVLL SSATLPPSLI KTLFDAYHAG RQHFNQAHFA TTEQPPIWCA WFDEYKSETL EISNSRSYIE QHKIFVSKRV KKLACQQVVR RGELVKLELA SPTTFDECVA ATLHRCLHQL HDMHHVVHPS GRKVSLGVVR MANINPMIAV AKLLINMSPQ ADYSIHYCVY HSQFPLAHRS YKESRLDNAL SRHDEANLWR QPEIQQALSM TNTSNNIFIV LGTSVVEVGR DHDYDWAIAE PSSLRALIQL AGRIQRHRQQ VPKTANLLVL NKNIRALKNE HPAYCKPGFE SAALPLLQHD LTQLLTTELD AISAIPRIME PVPSANGSEF QYSDLHKKQH AQAVNSFWGQ EHRALQLALG PVGKDKAGVI FYRSYKEANL WWKHDVAWSG EFIRQTAFRQ SQPQEAFLLR LPEDEILTWC QLDTTHKPYQ YPTLNHRFNS EIVPLAKGCF WWFKPSTEQI YQDLADLLDS SITKVSEQFG EINLRMANKD QPALVWAWHE QLGVYECKDN KDSPWN
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