| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3233 |
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| Symbol | |
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| ID | 5373411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3858044 |
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| End bp | 3858808 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640831483 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001367423 |
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| Protein GI | 153001742 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00276118 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATTGATA CCCATGCACA TCTAGATTTT GCCGAGTTTG ATCTTGACCG CGATGCTGTG
GTGCAGCGAA TGCGCAGTGT TGGGGTTAAT AATCTGATTA TTCCTGGCGT GTCCCCCCAA
CACTGGCACA AACAGCTCGC TGTTGCCGAA CAATATCAAA CCTATTTTGC CCTTGGCATC
CATCCTTGGT TTTGCCCAGA GGATGTTGAT GCTGCGATCT TAGCATTAAC ATCTAAAGTT
GCCGCGTTGC TCGAATGTCC TCGTTTTGTT GCTATTGGTG AATGTGGCTT AGATAAGCTT
TATTCCTCAA CATGGCCACA GCAGTTAGCG TTTTTTGAGG CGCAACTGAC GTTAGCTAAA
TCCGTTAATC TACCGGTGAT TATTCATAGT GTGAAGGCAC ATCCCGAGGT TTTGGCCTGT
TTAAAAAAGT ATCAATTGCC TAGAGGCGGT GTGATACATG CTTTTTCTGG CAGTGTTGAG
ATTGCACAGG AATATATCAA GTTAGGTTTT AAGCTGGGAA TTGGTGGTTT GATTATGAAT
CCCAATGCCA AAAAATTACT CAAAACTGTC ACCGAACTTC CGCTCGAACA CCTCATACTT
GAGACTGATT CCCCGGCGAT GACGCCGATA AATGTTGCAG AAAAACGTAA CCAACCCGCT
AACCTTGTTC TTTTTATAGA CAAAATCGCC GCTTTGCAAA AAAAATCAAG TGTTCTAATA
TCAGAACACT TGATGTCGAA TGCAGTGCAA CTGTTTGACC TTTAG
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| Protein sequence | MIDTHAHLDF AEFDLDRDAV VQRMRSVGVN NLIIPGVSPQ HWHKQLAVAE QYQTYFALGI
HPWFCPEDVD AAILALTSKV AALLECPRFV AIGECGLDKL YSSTWPQQLA FFEAQLTLAK
SVNLPVIIHS VKAHPEVLAC LKKYQLPRGG VIHAFSGSVE IAQEYIKLGF KLGIGGLIMN
PNAKKLLKTV TELPLEHLIL ETDSPAMTPI NVAEKRNQPA NLVLFIDKIA ALQKKSSVLI
SEHLMSNAVQ LFDL
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