Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3231 |
Symbol | |
ID | 5373409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3855398 |
End bp | 3856255 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640831481 |
Product | nucleoside-specific channel-forming protein Tsx |
Protein accession | YP_001367421 |
Protein GI | 153001740 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3248] Nucleoside-binding outer membrane protein |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000002039 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACG TTAAAACTTT AGCTTTAGCC GCTACTGCTG TAGCTGCAAT CTCTGGCAAC GCATTTGCCG CTGATCGTAC AGATCTTCAC GGTACTGATT ACAAGTGGAT GCAGTTCAAC GCTATGTACT CTATCGGTGA AAAACCAGAG AGCCCAGCGG CTGGCGATCA ACATAACTAC TTAGAAATGG AATTCGGCGG TCGTTCTGGC GTATTCGATC TATACGGTTA TGTTGACGTA TTCAACTTGG CAAACGAAAC ATCAAGCAAT GGTGACAAGA ATCCAGGTAC AGGTAAAAGT AAGCTGTTTA TGAAGTTTGC TCCACGTGTA TCTATCGATG CGCTTACTGG TAAAGACTTG TCTTTTGGAC CAATTCAAGA AGTTTACTTC TCTACTCTGT TCAACTGGGA TGGTAATGTA GGCGAAGGCG TTAACTCTAC TTTTTGGGGT GTTGGTGCTG ACGTAAACGT GCCTTGGTTA GGCAAAACAG GCATGAACCT GTACGGTTAC TATGACATGA ACGCTAAAGA GTGGAATGGC TACCAGTTCT CTGCTAACTG GTTCAAGCCT TTCTACTTCT TCGATAACAA GAGCTTCCTG TCATTCCAAG GTTACATCGA TTATCAATTT GGTGCTGACG AAGCATATTG GCCTGTTGTT GAGAATGGTC CTCTAGTTAA GGGTAAATCA ACAAACGGCG GTAACGTATT CTTCGGTCTA TACTGGCATT CAGATCGTTA TGCTCTGGGT TATGGCTTGA AAGGCTTCAA AGATGTTTAC TTACTAACTG ATGATGGTGC TACTGGCCTA GAATCAACAG GTTGGTCACA CTACCTGTCA GCAACTTACA AGTTCTAA
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Protein sequence | MKNVKTLALA ATAVAAISGN AFAADRTDLH GTDYKWMQFN AMYSIGEKPE SPAAGDQHNY LEMEFGGRSG VFDLYGYVDV FNLANETSSN GDKNPGTGKS KLFMKFAPRV SIDALTGKDL SFGPIQEVYF STLFNWDGNV GEGVNSTFWG VGADVNVPWL GKTGMNLYGY YDMNAKEWNG YQFSANWFKP FYFFDNKSFL SFQGYIDYQF GADEAYWPVV ENGPLVKGKS TNGGNVFFGL YWHSDRYALG YGLKGFKDVY LLTDDGATGL ESTGWSHYLS ATYKF
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