Gene Shew185_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3218 
Symbol 
ID5369927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3841338 
End bp3841709 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content43% 
IMG OID640831469 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001367409 
Protein GI153001728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAA GGCGCAAGTT TTCGCGGATT CTATTTGCCA CGAATGCACA TCTACAACAA 
GTTGTTGCAC AGTGGGAGAC AACCATTCTC GATTTGAGTC TAAATGGTGC CCTGGTCGAA
GAGCCGCAAA ATTTTATCCA CTCGGGTGAT GCTATTACCC TCAGTTTTAT CTTGCCCGAA
TCTGATATTG AGATCCGTAT GGAAACTGAG TTGGTCCATC AAAAAAATGC CCAATTAGGC
TTGAAGTGTA ACTTCATCGA CGTCGACAGC ATCAGCCACC TAAAACGTAT GGTGGAGCTT
AACTTAGGTG ATGCTTCCTT GCTGAATCGC GAACTTATGT TGTTTATCGA AAAACACAAT
ATCACAGATT AA
 
Protein sequence
MDERRKFSRI LFATNAHLQQ VVAQWETTIL DLSLNGALVE EPQNFIHSGD AITLSFILPE 
SDIEIRMETE LVHQKNAQLG LKCNFIDVDS ISHLKRMVEL NLGDASLLNR ELMLFIEKHN
ITD