Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3216 |
Symbol | |
ID | 5369925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3839353 |
End bp | 3840444 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640831467 |
Product | TMAO reductase system periplasmic protein TorT |
Protein accession | YP_001367407 |
Protein GI | 153001726 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | [TIGR02955] TMAO reductase system periplasmic protein TorT |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGAA AATATTGGCA ACGATTGTTC ACACTCGCCA CATTTGGCCT CGTGTTTTCA GGCTATGCGA CAAGTGAAAA CCTCACTTGG CCATTAGAGC AGCGCACGCC ATTCAATGTC AAAATCCAGC AATCCCAGAC ATTAAACTAC TTACCGCTGA CAAAAGCTCA AAAGCCTTGG CGGATCTGCG CCCTAGTACC ACACCTTAAA GATGCCTACT GGATTGGCAT TGATTATGGG CTGATCCAAC ATGCCAAAAC CCTTGGCGTC TCACTCGATC TCTTCGAAGC AGGCAGTTAT TACCATAAAG ATAAACAACT GGCACAGCTC CAAAGCTGTA TGCAAGGCGA CTATGATGCC ATCTTGCTCG GCTCAGTCAG CCCAGATTTA CTCGCCCAAT TTACAACACC GCTCACTAAA CCCGTGTTAG CCCTAGTCAA TAAACTCAAT AGCGACCGAG TCCAAACCCA TATTGGCGTG AACTGGTATC AAATGGGGTT ACTGGCGGGT AACTTCATCA AAGCCGATGC TGCAGCACAA CATCCACATC AAACGGCAAA TTTGGCACTC TTGGCCGGAC CAGAAAACGT AGGTGGCACA GATTTAGTTG AGCAAGGTAT ACGTCAGGCG CTTGAAGGGA GCCAAGTCAA GATTAGTGCA ATTCAGCACG CCGATAATAA TCGCAATTTG TATCGTGACC AGTTGCAGAT GCTGCTAAAA GCTCAGCAGC CGGATTATAT TCTCGGCAGC GCAGTGGCGA TTGAAGCCGC CATTAGTACT TTGAAACAAA AGGGATTAAG TAACAGAGTC AAGCTAGTAA GCAGTTACTT GTCCCCCGCT ATTTTACGTG GGCTAAAACG GGAAAAAGTC ATCTACAGCA ATGATGATTT AGTCGTGTTA CAGGGGAAAC TCGCAATTGA TGTCACAGTG AAACAACTCG AAGGCGCTAA GGCATTTGGC GATATAGGCC CAGCGATCAT CAAGCGAACA TCATCCTTTA ACACTTTGTC CCAATTAGAT TTCAGCCTAG CGGAAGCCGA CTTTTACCCT CTGTACCAAG TGCGACCTAA CTCCATTAAT CGTCCACTTT AG
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Protein sequence | MMRKYWQRLF TLATFGLVFS GYATSENLTW PLEQRTPFNV KIQQSQTLNY LPLTKAQKPW RICALVPHLK DAYWIGIDYG LIQHAKTLGV SLDLFEAGSY YHKDKQLAQL QSCMQGDYDA ILLGSVSPDL LAQFTTPLTK PVLALVNKLN SDRVQTHIGV NWYQMGLLAG NFIKADAAAQ HPHQTANLAL LAGPENVGGT DLVEQGIRQA LEGSQVKISA IQHADNNRNL YRDQLQMLLK AQQPDYILGS AVAIEAAIST LKQKGLSNRV KLVSSYLSPA ILRGLKREKV IYSNDDLVVL QGKLAIDVTV KQLEGAKAFG DIGPAIIKRT SSFNTLSQLD FSLAEADFYP LYQVRPNSIN RPL
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