Gene Shew185_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3216 
Symbol 
ID5369925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3839353 
End bp3840444 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content47% 
IMG OID640831467 
ProductTMAO reductase system periplasmic protein TorT 
Protein accessionYP_001367407 
Protein GI153001726 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID[TIGR02955] TMAO reductase system periplasmic protein TorT 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGAA AATATTGGCA ACGATTGTTC ACACTCGCCA CATTTGGCCT CGTGTTTTCA 
GGCTATGCGA CAAGTGAAAA CCTCACTTGG CCATTAGAGC AGCGCACGCC ATTCAATGTC
AAAATCCAGC AATCCCAGAC ATTAAACTAC TTACCGCTGA CAAAAGCTCA AAAGCCTTGG
CGGATCTGCG CCCTAGTACC ACACCTTAAA GATGCCTACT GGATTGGCAT TGATTATGGG
CTGATCCAAC ATGCCAAAAC CCTTGGCGTC TCACTCGATC TCTTCGAAGC AGGCAGTTAT
TACCATAAAG ATAAACAACT GGCACAGCTC CAAAGCTGTA TGCAAGGCGA CTATGATGCC
ATCTTGCTCG GCTCAGTCAG CCCAGATTTA CTCGCCCAAT TTACAACACC GCTCACTAAA
CCCGTGTTAG CCCTAGTCAA TAAACTCAAT AGCGACCGAG TCCAAACCCA TATTGGCGTG
AACTGGTATC AAATGGGGTT ACTGGCGGGT AACTTCATCA AAGCCGATGC TGCAGCACAA
CATCCACATC AAACGGCAAA TTTGGCACTC TTGGCCGGAC CAGAAAACGT AGGTGGCACA
GATTTAGTTG AGCAAGGTAT ACGTCAGGCG CTTGAAGGGA GCCAAGTCAA GATTAGTGCA
ATTCAGCACG CCGATAATAA TCGCAATTTG TATCGTGACC AGTTGCAGAT GCTGCTAAAA
GCTCAGCAGC CGGATTATAT TCTCGGCAGC GCAGTGGCGA TTGAAGCCGC CATTAGTACT
TTGAAACAAA AGGGATTAAG TAACAGAGTC AAGCTAGTAA GCAGTTACTT GTCCCCCGCT
ATTTTACGTG GGCTAAAACG GGAAAAAGTC ATCTACAGCA ATGATGATTT AGTCGTGTTA
CAGGGGAAAC TCGCAATTGA TGTCACAGTG AAACAACTCG AAGGCGCTAA GGCATTTGGC
GATATAGGCC CAGCGATCAT CAAGCGAACA TCATCCTTTA ACACTTTGTC CCAATTAGAT
TTCAGCCTAG CGGAAGCCGA CTTTTACCCT CTGTACCAAG TGCGACCTAA CTCCATTAAT
CGTCCACTTT AG
 
Protein sequence
MMRKYWQRLF TLATFGLVFS GYATSENLTW PLEQRTPFNV KIQQSQTLNY LPLTKAQKPW 
RICALVPHLK DAYWIGIDYG LIQHAKTLGV SLDLFEAGSY YHKDKQLAQL QSCMQGDYDA
ILLGSVSPDL LAQFTTPLTK PVLALVNKLN SDRVQTHIGV NWYQMGLLAG NFIKADAAAQ
HPHQTANLAL LAGPENVGGT DLVEQGIRQA LEGSQVKISA IQHADNNRNL YRDQLQMLLK
AQQPDYILGS AVAIEAAIST LKQKGLSNRV KLVSSYLSPA ILRGLKREKV IYSNDDLVVL
QGKLAIDVTV KQLEGAKAFG DIGPAIIKRT SSFNTLSQLD FSLAEADFYP LYQVRPNSIN
RPL