| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3213 |
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| Symbol | |
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| ID | 5373650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3832915 |
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| End bp | 3835404 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831464 |
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| Product | trimethylamine-N-oxide reductase TorA |
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| Protein accession | YP_001367404 |
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| Protein GI | 153001723 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAA GAGACTTTTT AAAGGGTATC GCCTCATCCT CTTTCGTTGT CTTAGGTGGC
AGCTCAGTGT TAGCGCCCTT AAATGCCTTA GCCAAAGCGG GCATCAATGA AGATGAATGG
CTAACCACAG GTTCACACTT CGGCGCCTTT AAAATGAAGC GCAAAAACGG CGTCATTGCC
GAAGTGAAAC CCTTCGACTT AGATAAGTAT CCAACGGATA TGATTAACGG CATCCGCGGC
ATGGTCTACA ATCCATCCCG TGTACGTTAC CCTATGGTGC GCTTAGATTT TTTACTCAAA
GGTCATAAGA GTAATACCCA TCAACGGGGT GATTTCCGCT TTGTTCGTGT AACGTGGGAC
AAGGCATTAC AGCTGTTTAA GCATTCATTA GATGAAGTCC AAACCCAATA CGGTCCATCG
GGTCTGCATG CGGGTCAAAC CGGTTGGCGC GCCACGGGTC AACTGCATTC CAGCACGAGT
CATATGCAAC GTGCGGTGGG GATGCACGGC AACTATGTGA AGAAAATCGG CGACTACTCC
ACAGGTGCAG GCCAAACGAT TCTGCCCTAT GTGTTAGGTT CAACCGAAGT GTATGCCCAA
GGCACTTCAT GGCCGCTGAT CTTAGAACAC AGCGACACTA TCGTGCTCTG GTCGAACGAT
CCTTACAAGA ACCTGCAAGT GGGTTGGAAT GCGGAAACCC ATGAATCTTT TGCCTATCTT
GCGCAGTTAA AAGAGAAAGT GAAGCAAGGC AAGATCCGCG TGATCAGTAT CGACCCTGTG
GTGACTAAGA CCCAAGCCTA TTTGGGCTGT GAGCAACTCT ACGTTAACCC ACAGACAGAC
GTGACTTTAA TGCTGGCCAT CGCCCACGAG ATGATCAGCA AAAAGCTCTA CGACGATAAA
TTTATCCAAG GCTACAGCTT AGGTTTTGAA GAGTTTGTGC CCTATGTGAT GGGTACTAAA
GATGGCGTAG CCAAAACCCC AGAATGGGCC GCGCCTATCT GTGGTGTTGA AGCCCATGTT
ATCCGCGATT TAGCCAAAAC CTTAGTCAAG GGTCGCACTC AATTCATGAT GGGTTGGTGT
ATCCAGCGCC AGCAACACGG CGAACAACCC TATTGGATGG CGGCGGTACT GGCGACCATG
ATCGGCCAAA TCGGTCTACC CGGTGGTGGC ATCAGCTATG GTCATCACTA CTCGAGTATC
GGGGTGCCTT CATCGGGTGC CGCGGCGCCA GGTGCTTTCC CCCGTAACTT GGACGAAAAT
CAAAAGCCAC TATTTGATAG CTCAGACTTC AAGGGCGCGA GCAGCACAAT TCCGGTTGCC
CGCTGGATTG ATGCGATTCT CGAACCCGGT AAAACCATTG ATGCTAACGG CTCGAAAGTG
GTTTATCCCG ATATCAAGAT GATGATTTTC TCGGGTAATA ATCCTTGGAA CCATCACCAA
GACAGAAACC GTATGAAGCA AGCCTTTCAT AAGCTTGAGT GTGTGGTCAC TGTTGATGTG
AACTGGACGG CAACTTGCCG CTTCTCGGAT ATCGTACTGC CCGCTTGTAC TACCTATGAG
CGCAACGATA TCGACGTGTA CGGCGCTTAT GCTAACCGCG GTATTTTAGC CATGCAAAAG
ATGGTTGAGC CACTGTTTGA TAGCTTGTCG GATTTTGAAA TTTTCACTCG CTTTGCCGCC
GTACTCGGCA AAGAGAAAGA ATACACCCGT AACATGGGCG AAATGGAGTG GTTAGAAACC
CTCTATAACG AATGTAAAGC CGCCAACGCG GGCAAGTTTG AGATGCCTGA CTTTGCGACT
TTCTGGAAAC AAGGTTATGT ACATTTTGGT GACGGTGAAG TCTGGACGCG CCATGCAGAC
TTTAGAAACG ATCCTGAAAT CAATCCACTA GGCACGCCTT CAGGTTTGAT TGAAATCTTT
AGCCGTAAGA TTGATCAATT CGGTTACGAT GACTGTAAAG GTCACCCAAC TTGGATGGAG
AAAACCGAGC GTAGCCATGG CGGCCCTGGC TCTGACAAGC ATCCGATTTG GTTGCAGTCA
TGCCACCCAG ACAAACGCTT ACACTCGCAA ATGTGTGAGT CGCGAGAATA CCGCGAGACC
TACGCAGTCA ATGGCCGTGA GCCTGTGTAT ATCTGCCCTG TCGACGCAAA AGCGCGCGGC
ATCAAAGATG GCGATATAGT GCGAGTCTTT AACGACCGTG GCCAACTGTT GGCAGGTGCT
GTGGTATCGG ACAACTTCCC TACTGGTATT GTGCGGATTC ACGAAGGCGC ATGGTATGGG
CCAGTAGGTA AAGATGGTAG CACTGAAGGT GGGGCAGAAG TCGGCGCCCT GTGCAGTTAT
GGCGATCCTA ACACCCTCAC TTTAGACATA GGCACCTCTA AACTTGCCCA AGCTTGCTCA
GCCTATACTT GCTTAGTCGA GTTTGAGAAA TACCAAGGCA AAGTGCCTAA GGTCAGCTCC
TTCGATGGCC CTATCGAAGT CGAAATCTAA
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| Protein sequence | MNRRDFLKGI ASSSFVVLGG SSVLAPLNAL AKAGINEDEW LTTGSHFGAF KMKRKNGVIA
EVKPFDLDKY PTDMINGIRG MVYNPSRVRY PMVRLDFLLK GHKSNTHQRG DFRFVRVTWD
KALQLFKHSL DEVQTQYGPS GLHAGQTGWR ATGQLHSSTS HMQRAVGMHG NYVKKIGDYS
TGAGQTILPY VLGSTEVYAQ GTSWPLILEH SDTIVLWSND PYKNLQVGWN AETHESFAYL
AQLKEKVKQG KIRVISIDPV VTKTQAYLGC EQLYVNPQTD VTLMLAIAHE MISKKLYDDK
FIQGYSLGFE EFVPYVMGTK DGVAKTPEWA APICGVEAHV IRDLAKTLVK GRTQFMMGWC
IQRQQHGEQP YWMAAVLATM IGQIGLPGGG ISYGHHYSSI GVPSSGAAAP GAFPRNLDEN
QKPLFDSSDF KGASSTIPVA RWIDAILEPG KTIDANGSKV VYPDIKMMIF SGNNPWNHHQ
DRNRMKQAFH KLECVVTVDV NWTATCRFSD IVLPACTTYE RNDIDVYGAY ANRGILAMQK
MVEPLFDSLS DFEIFTRFAA VLGKEKEYTR NMGEMEWLET LYNECKAANA GKFEMPDFAT
FWKQGYVHFG DGEVWTRHAD FRNDPEINPL GTPSGLIEIF SRKIDQFGYD DCKGHPTWME
KTERSHGGPG SDKHPIWLQS CHPDKRLHSQ MCESREYRET YAVNGREPVY ICPVDAKARG
IKDGDIVRVF NDRGQLLAGA VVSDNFPTGI VRIHEGAWYG PVGKDGSTEG GAEVGALCSY
GDPNTLTLDI GTSKLAQACS AYTCLVEFEK YQGKVPKVSS FDGPIEVEI
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