Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3203 |
Symbol | |
ID | 5369730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3822334 |
End bp | 3823452 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640831455 |
Product | putative transposase |
Protein accession | YP_001367395 |
Protein GI | 153001714 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAACCT CCTACCATTT AAGCGATATC CTTCATCAGC ACTTAGCCCA CTATCAACAG CAGCATAAAC TGACCGAACA GCAAGCCTTA GTCTGCCAGC ATATTCAACT GTGTCGCACG CAAGCCTTAG GTATACAGCA ATGGCGTTGT GATACTTGCC AGTATGTGCA GCAGGTATTT TGCTCCTGTG GTGACCGGCA TTGTCCTCGT TGTCAGGGAA GGCAGACGCA AGCGTGGATT GCAGCGCAGC AGGCGCAAGT CTTGCCTTGC CGCTATTTCC ACTTGGTCTT TACCTTACCT CACGAGCTGA ACATCTTGGC GCACTACGCG GCTAAGTCGC TCTATAGCGC CCTGTTTGAG TCTGTGTGGC AGACGCTTGC GCAGTTTGGC ATGAAACGGA AACACCTTCA GGGTCAATTG GGTTGCACTA TGGTATTGCA TACGTGGGGG CAAACCTTGA GTCAGCATAT TCACTTGCAT TGCTTAATTC CAGGCGGGGT GGTGACGTCA GCGGGAGATT GGCATGGCGT AAAAACGGAT TATCTGTTTC CGGTTAAAGC CTTGTCCACC GTGTATCGGG CCAAGTTATT ACGGGCGCTG CGACAACATG AGCTGGCTAT CCCTGCGGCT GACACCTTAA TGGCAAAACC GTGGTGTGTT TACAGCAAAG CGTGTCTGAG CCGCGCCGAA ACCGTGGTGG AATATCTCGG GCGTTATACC CGTAAAGGCA TGCTGCATGA ATCAAGAATT GCCGAAGTGA CCGTAGAGCA TGTCAGTTTT CGCTACAAGG ACTATCGTGA CGGTCAGCAG CATAAGCAAA TGCGGCTAAG CTGTGATGAG TTTATCCGCC GTTACTTATT GCATGTGTTG CCCAAAGGGT TAATGCGAGT CAGGCACTTT GGCTTTTTAG CCAACGCTTG CCGCCGCAAA AAGCTCGCGC TCATCCTGCC GCAATTACGC AAACCGCAGG CGACATTGGT TAACCCCTTG GTTAAGGAGG ACTGTATGTG GTCATGTCCG CAATGCCAGT TAGGTCATTT GCAGTTTATT GGGCTGATAA GACTGCAGAG ATTAGTGATG TTTAACAACC AAAGTCAGCC AGCATGCCTG TCAGGATAA
|
Protein sequence | MATSYHLSDI LHQHLAHYQQ QHKLTEQQAL VCQHIQLCRT QALGIQQWRC DTCQYVQQVF CSCGDRHCPR CQGRQTQAWI AAQQAQVLPC RYFHLVFTLP HELNILAHYA AKSLYSALFE SVWQTLAQFG MKRKHLQGQL GCTMVLHTWG QTLSQHIHLH CLIPGGVVTS AGDWHGVKTD YLFPVKALST VYRAKLLRAL RQHELAIPAA DTLMAKPWCV YSKACLSRAE TVVEYLGRYT RKGMLHESRI AEVTVEHVSF RYKDYRDGQQ HKQMRLSCDE FIRRYLLHVL PKGLMRVRHF GFLANACRRK KLALILPQLR KPQATLVNPL VKEDCMWSCP QCQLGHLQFI GLIRLQRLVM FNNQSQPACL SG
|
| |