Gene Shew185_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3203 
Symbol 
ID5369730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3822334 
End bp3823452 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content51% 
IMG OID640831455 
Productputative transposase 
Protein accessionYP_001367395 
Protein GI153001714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCT CCTACCATTT AAGCGATATC CTTCATCAGC ACTTAGCCCA CTATCAACAG 
CAGCATAAAC TGACCGAACA GCAAGCCTTA GTCTGCCAGC ATATTCAACT GTGTCGCACG
CAAGCCTTAG GTATACAGCA ATGGCGTTGT GATACTTGCC AGTATGTGCA GCAGGTATTT
TGCTCCTGTG GTGACCGGCA TTGTCCTCGT TGTCAGGGAA GGCAGACGCA AGCGTGGATT
GCAGCGCAGC AGGCGCAAGT CTTGCCTTGC CGCTATTTCC ACTTGGTCTT TACCTTACCT
CACGAGCTGA ACATCTTGGC GCACTACGCG GCTAAGTCGC TCTATAGCGC CCTGTTTGAG
TCTGTGTGGC AGACGCTTGC GCAGTTTGGC ATGAAACGGA AACACCTTCA GGGTCAATTG
GGTTGCACTA TGGTATTGCA TACGTGGGGG CAAACCTTGA GTCAGCATAT TCACTTGCAT
TGCTTAATTC CAGGCGGGGT GGTGACGTCA GCGGGAGATT GGCATGGCGT AAAAACGGAT
TATCTGTTTC CGGTTAAAGC CTTGTCCACC GTGTATCGGG CCAAGTTATT ACGGGCGCTG
CGACAACATG AGCTGGCTAT CCCTGCGGCT GACACCTTAA TGGCAAAACC GTGGTGTGTT
TACAGCAAAG CGTGTCTGAG CCGCGCCGAA ACCGTGGTGG AATATCTCGG GCGTTATACC
CGTAAAGGCA TGCTGCATGA ATCAAGAATT GCCGAAGTGA CCGTAGAGCA TGTCAGTTTT
CGCTACAAGG ACTATCGTGA CGGTCAGCAG CATAAGCAAA TGCGGCTAAG CTGTGATGAG
TTTATCCGCC GTTACTTATT GCATGTGTTG CCCAAAGGGT TAATGCGAGT CAGGCACTTT
GGCTTTTTAG CCAACGCTTG CCGCCGCAAA AAGCTCGCGC TCATCCTGCC GCAATTACGC
AAACCGCAGG CGACATTGGT TAACCCCTTG GTTAAGGAGG ACTGTATGTG GTCATGTCCG
CAATGCCAGT TAGGTCATTT GCAGTTTATT GGGCTGATAA GACTGCAGAG ATTAGTGATG
TTTAACAACC AAAGTCAGCC AGCATGCCTG TCAGGATAA
 
Protein sequence
MATSYHLSDI LHQHLAHYQQ QHKLTEQQAL VCQHIQLCRT QALGIQQWRC DTCQYVQQVF 
CSCGDRHCPR CQGRQTQAWI AAQQAQVLPC RYFHLVFTLP HELNILAHYA AKSLYSALFE
SVWQTLAQFG MKRKHLQGQL GCTMVLHTWG QTLSQHIHLH CLIPGGVVTS AGDWHGVKTD
YLFPVKALST VYRAKLLRAL RQHELAIPAA DTLMAKPWCV YSKACLSRAE TVVEYLGRYT
RKGMLHESRI AEVTVEHVSF RYKDYRDGQQ HKQMRLSCDE FIRRYLLHVL PKGLMRVRHF
GFLANACRRK KLALILPQLR KPQATLVNPL VKEDCMWSCP QCQLGHLQFI GLIRLQRLVM
FNNQSQPACL SG