| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3194 |
|---|
| Symbol | |
|---|
| ID | 5369942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3810962 |
|---|
| End bp | 3812851 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640831447 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001367387 |
|---|
| Protein GI | 153001706 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAGA AACATTTAAT AGCAGTCGCA GTCGCAACTG GACTTGCTTA CTTCCCTGTT
AACGCTAATG AATACCAAGC GACTATGGTA AGTGTCCCAC AATCTAAAGC CATCAAAGAT
ACTTATATCG TTGTATTCAA TACCCCAAGT GTTCTTAATC TAAGTAATAA CAACACCATA
GCTGAATTCG CGGTTCAACA AGCCGAGAGT TTAGTCAATC AATATGATGT CAGAGTGATG
AAAAACTTTG GCAATGTGCT CAACGGTGTA CTCATCAATG CCAGTGCCCA ACAAGTTAAG
GCACTGCTTA AAGATCCAAA CGTGAAGTAC GTAGAACAAG ATCAAGTGAT GTCGGTAACG
CCCATGATGG AAGCCAATGC GGACCAACCG AGTCCGACCT GGGGCATAGA CAGAATCGAT
CAACGCAACT TGCCATTGGA TAATAACTAC CACACGGATT ACGATGGATC TGGTGTGACC
GCCTTTGTTA TCGATACTGG CGTGCTTAAT ACACATAATG AGTTTGTCGG CCGCGCAAGC
AGTGGCTATG ACTTTATCGA TAATGATTAC GATGCGACTG ACTGTAACGG TCATGGTACC
CATGTGGCGG GAACGATTGG CGGCTCAACC TACGGTGTCG CGAAAAACGT CAATGTGGTG
GGCGTCAGAG TGCTTAACTG TTCAGGTTCG GGCAGTAACT CTGGCGTGAT TGCAGGGATA
AACTGGGTGA AAAACAATGC TTCTGGCCCC GCTGTCGCGA ACATGAGTTT AGGGGGCGGC
GCCTCCCAAG CCACGGATGA TGCCGTCAAT GCCGCTGTTG CCGCAGGGAT CACCTTCGTA
GTCGCAGCCG GCAATGATAA TAGTAATGCC TGTAACTACT CCCCAGCTCG TGCCGCGGAT
GCCATCACTG TCGGTTCAAC CACCAGTAAC GATTCCCGCT CGAGTTTTTC TAACTACGGG
ACTTGCCTTG ATATCTATGC GCCCGGTTCG AGCATAACTT CCTCTTGGTA TACCTCAAAT
TCGGCGACTA ATACTATTAG TGGCACCTCA ATGGCTTCCC CCCATGTGGC AGGCGTCGCG
GCATTATACT TAGATGAAAA CCCTAACCTT TCCCCCGCAC AGGTGACTAA CTTACTCAAG
ACGCGCGCCA CTGCGGACAA AGTCACAGAT GCTAAGACAG GCTCACCGAA TAAGTTACTG
TTTTCACTTG AAAATGATGA TGGTGGCTGT GGCAATGATT GCCCCGTTGA CGAGACTCAG
CTGCAAAATA ATGTGGGTAT TGCGATCAGT GGAGCCACAG GTTCAGCGAC TTATTACTAT
ATCGATGTCC CCGCAAATGC GGCAAGTTTA GGCATCAACC TCGCGGGGGG CTCTGGCGAT
GCGGATATTT ATGTGAGCCA AGGACAAAAA CCGACTACGA CCAGCTATCA ATGCCGCCCA
TATCAAAATG GCAACAATGA GAGCTGTAAT TTCACTGCAC CTACGGCGGG TCGTTGGTAC
GTGATGGTTC AAGGCTATAG CAATTATGCC AACGCCCAGC TGACAGCCAG CTACAACCTC
AATGGCGGCG GAAATTGTAC CGATGCGAAC TGCTTAAGCA ATGGCGTACC CGTCACGAAT
TTAAGCGGAG CAACGGGAAC TGAAGCCCTG TATAAAATCG TCGTCCCAGC GAATAGCCAA
CTCAGTATTA CCACCAGTGG CGGGACTGGT GACGTGGATC TGTATGTCAA AGCAGGGACT
GTCCCAACGA CCACCAGCTA TGATTGTCGT CCCTATAAAA ACGGTAACAA TGAAAGCTGT
TCAATCACCG TGACTCAAGC GGGAACTTAC CATGTGATGT TACGTGGTTA TGCTAATTAC
TCGGGCGTTC AGCTGAGTGC AAGCTACTAG
|
|---|
| Protein sequence | MHKKHLIAVA VATGLAYFPV NANEYQATMV SVPQSKAIKD TYIVVFNTPS VLNLSNNNTI
AEFAVQQAES LVNQYDVRVM KNFGNVLNGV LINASAQQVK ALLKDPNVKY VEQDQVMSVT
PMMEANADQP SPTWGIDRID QRNLPLDNNY HTDYDGSGVT AFVIDTGVLN THNEFVGRAS
SGYDFIDNDY DATDCNGHGT HVAGTIGGST YGVAKNVNVV GVRVLNCSGS GSNSGVIAGI
NWVKNNASGP AVANMSLGGG ASQATDDAVN AAVAAGITFV VAAGNDNSNA CNYSPARAAD
AITVGSTTSN DSRSSFSNYG TCLDIYAPGS SITSSWYTSN SATNTISGTS MASPHVAGVA
ALYLDENPNL SPAQVTNLLK TRATADKVTD AKTGSPNKLL FSLENDDGGC GNDCPVDETQ
LQNNVGIAIS GATGSATYYY IDVPANAASL GINLAGGSGD ADIYVSQGQK PTTTSYQCRP
YQNGNNESCN FTAPTAGRWY VMVQGYSNYA NAQLTASYNL NGGGNCTDAN CLSNGVPVTN
LSGATGTEAL YKIVVPANSQ LSITTSGGTG DVDLYVKAGT VPTTTSYDCR PYKNGNNESC
SITVTQAGTY HVMLRGYANY SGVQLSASY
|
|---|
| |