Gene Shew185_3189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3189 
Symbol 
ID5369771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3805307 
End bp3805738 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content47% 
IMG OID640831442 
Productthioesterase superfamily protein 
Protein accessionYP_001367382 
Protein GI153001701 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAAT TTAGCCCGAC CTTCTCCTTC CCAGTGCAAA TCTACTATGA AGATACTGAT 
TTTTCTGGCG TGGTGTATCA CCCTAACTTT TTGAAATACT TCGAGCGTGC CCGCGAGCAT
GTGATTGGTG CCGAGCGTTT AAGTGCGTTG TGGCAACAAA ACCAACTGGG TTTTGCTGTG
TATCGTAGTG ATATGCTGTG CCATGAAGGG GTGGAATTTG CCGATATTAT CGATGTTCGC
ACTAAGTTTT ACTTTGAGAG TAAATACCGT ACTGTGTGGC AGCAGGAGAT TTGGCGCCCA
CAGGGTAAAA AGCCTGCGGT CACAGCCACA ATTGAAATGG TGTGTATGAA TCAAGCCCGC
CAACTAGCGC CTATGCCGGC AGATTTAATT GCCGTCTTAA GTCAGGGTTT TGTTTCAAGC
GAACAGAACT AA
 
Protein sequence
MLQFSPTFSF PVQIYYEDTD FSGVVYHPNF LKYFERAREH VIGAERLSAL WQQNQLGFAV 
YRSDMLCHEG VEFADIIDVR TKFYFESKYR TVWQQEIWRP QGKKPAVTAT IEMVCMNQAR
QLAPMPADLI AVLSQGFVSS EQN