| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3178 |
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| Symbol | |
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| ID | 5369575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3789734 |
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| End bp | 3792040 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640831431 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001367371 |
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| Protein GI | 153001690 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATA GTTTTCGCGC TCGGCTGATT TTAGTTTTCT TTATTGTGCT GACTCTAGTG
CAGTTTGCCA CGGCATTTTC CGTATTGACG GCGACCGAAA GGGACAACTT TTTACAGCAA
CAAAAAAGTT TAGATATTGG TGCCAATGTG TTTCTCGAAG TTCTTTCTAA TCGCGGTATT
CAGCTCAGCC AAAGTTTGTC TGTGCTCAGT GCCGATTTTG GTTTTAAGCG CGCAATTGCC
ACCGGCGAGC AAGAAACCAT TGAGTCAGTG TTATCCAATC ACGGCTCTCG TATCGGCGCC
GACGCTGCAG TATTGTTGTC TCCAAAAGGA GAGCTCTTGA CCTCGAGTCT ACCCGGACTC
ACTCAGGATG ACATTCAATC CTTATTCGAT ATGACCACCA GCAATAACAA TGCTTTAGCT
ATCCTCAATT TTGATCATGC CAGCTATCAG TTTGTGTTGC AGCCCGTGAA GGCGCCGACC
TTGATTGCTT GGGTCGGAAT GGGGTTCCTA TTGGATGAGA AAGTCGCCCA ACAAGCTAAA
GCCATTACCG GTATCGATGT GAGCTTTGTC AATCAAGCCA CGGGTCGTAC CGAAATCGCG
TCAACCTTAT CCGACGATGA AAAACGCAGT GTGGTAGAGC AGGCGAGCCT ATTCCCCAGC
CTACTGAAAA TGCCCAGTGA GAACATTCCC GTGGATTATC TGTCCATGGC GATCAAACTT
TATGATCATA ACGGCAGCCA ATTAGCCCTA CTGCATCAGT CAAACCTTAA GTGGCAGCAA
AGTTATCAGC ATCTACGCAA TAATATGTTG CTGATTTTTG CTTTGACCTT AGCGCTGGCG
ATTGTAATTG CGATTTGGTT GTCGGGCAGT TTGACTGAGC CTGTGCATCA ACTGGTAACA
TATGCCCGTA AAATTGGTCA AGGTAAGCAG CCTGGCAGTA TTCAAGGTGC GCCAGCAGAA
CTGCGGGTGT TGGCCAAAAG TTTGTCCTTG ATGCGCGACG ATATTGAAGC GCGGGAAAAG
GATTTAGTCT ATCAATCTCG CCACGACAGT TTGACGGGAT TGCTCAATCG TTTTGCGGCA
AAACAGCATT TAGCAGATCT TAAACATGAG CTATCCGGCG CTATGGTATT GCTGGATATT
AAACATTTTC GCCATATCAA CGACATTATC GGTTTTGCTA ACGCCGATAC TTTGTTGCTG
CTTTTTGCCC GTCGCTTAGA GCTATTAGCC CCCACTCCAG ATTTACTCGC GCGATTAGAC
GGCGACTCAT TTTTACTCCT GTATAGCCAA GGTATTCGTC CCGAGCACTT GCTGAAATCA
TTGGATATGT TGGAGTCGCC ATTTCCAATC CAAGGCTCAA ATATCTCTCT TACCGTGCGG
GCGGGATTAC TGGAAATCGA TGGCAACGGT GCCGATATCG ATGTGTTAGT GCGCCGCGCC
GAAATTGCCC TCAATCAAGC CTGTCTCGAG GAGCAACGCA TTGTCAGTTA TCGTCAGGGC
GCCGATGAGA AATACCAGCG TGAGCTGACT ATTATCCGCG ATTTGCCCAT AGGTTTGGCG
CAAAACCAAC TCTATCTCGT GTTTCAACCT AAGGTGGATT TACACTTAAA TCAGTGTACT
GGCGCCGAGG CACTGATCCG CTGGCAGCAT CCAACCTTAG GGTTTATTCC GCCCGATGAG
TTTATTCAAC TCGCTGAAAA CTCTGGCAAC ATTGATATAG TCAGCCAATG GGTGTTGAAG
CAGGCGATTA AACAATTAGT CGCATGGCAG CAGCGAGGTA TGCAGCTAAA ACTGGCCATT
AACCTGTCGG CCCATGATTT AGTCGATACT CGTTTGCCGA ATCAAATTGC TAGTTTATTA
AAAGATAATA ATCTGCCAAG CGGCGCACTC TGCATCGAAG TCACCGAAGG CGCTGTGATG
AAAGATGCAC AGACAGTGGT GAGCGTATTG CAGCGATTCC GTGACATGGG TGTATCCGTC
GCCATCGATG ACTTTGGCAC AGGGCATTCA TCCTTAGCTT ATTTGAAAAT TTTGCCCGTC
AATGAAGTGA AGATTGATCG TAGCTTTATC AAAGACATGC TCACGAATAG CCAAGATGTG
ATGATAGTGA ACACGAGTAT TCAGTTGATC CACGGCCTAG GTTTTACCGT CGTGGCCGAA
GGGGTTGAGG AACCAGAAGG CGTTGAAATC CTGCGTAACC TCAATTGCGA CATCATCCAA
GGCTACGTGT TTTCAAAACC CTTAAAAGCG GCTGAATTTG ATCTGTGGTT CGAAGCGTTT
AACCATGCAA ATCCCTCAGA CACATAA
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| Protein sequence | MLNSFRARLI LVFFIVLTLV QFATAFSVLT ATERDNFLQQ QKSLDIGANV FLEVLSNRGI
QLSQSLSVLS ADFGFKRAIA TGEQETIESV LSNHGSRIGA DAAVLLSPKG ELLTSSLPGL
TQDDIQSLFD MTTSNNNALA ILNFDHASYQ FVLQPVKAPT LIAWVGMGFL LDEKVAQQAK
AITGIDVSFV NQATGRTEIA STLSDDEKRS VVEQASLFPS LLKMPSENIP VDYLSMAIKL
YDHNGSQLAL LHQSNLKWQQ SYQHLRNNML LIFALTLALA IVIAIWLSGS LTEPVHQLVT
YARKIGQGKQ PGSIQGAPAE LRVLAKSLSL MRDDIEAREK DLVYQSRHDS LTGLLNRFAA
KQHLADLKHE LSGAMVLLDI KHFRHINDII GFANADTLLL LFARRLELLA PTPDLLARLD
GDSFLLLYSQ GIRPEHLLKS LDMLESPFPI QGSNISLTVR AGLLEIDGNG ADIDVLVRRA
EIALNQACLE EQRIVSYRQG ADEKYQRELT IIRDLPIGLA QNQLYLVFQP KVDLHLNQCT
GAEALIRWQH PTLGFIPPDE FIQLAENSGN IDIVSQWVLK QAIKQLVAWQ QRGMQLKLAI
NLSAHDLVDT RLPNQIASLL KDNNLPSGAL CIEVTEGAVM KDAQTVVSVL QRFRDMGVSV
AIDDFGTGHS SLAYLKILPV NEVKIDRSFI KDMLTNSQDV MIVNTSIQLI HGLGFTVVAE
GVEEPEGVEI LRNLNCDIIQ GYVFSKPLKA AEFDLWFEAF NHANPSDT
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