| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3174 |
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| Symbol | |
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| ID | 5370934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3786597 |
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| End bp | 3787460 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640831427 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001367367 |
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| Protein GI | 153001686 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCCA AATACACCAG TTTTGATAAA TCTGCTAAAA CCTGTCTTCG CAAACAAGTG
ATTACGGAGG ATTTATCTTG GGCCCATTAT CAAAATGCGG GCGAGCGTTT GTATTACCAA
AACGACACAC AACACACGCT GAGCATGTAT CTGGATGGCG GCTACGAAAC CCACAGAACC
GATATCAAAG CCGACTATGG TGCGCCCAGC AAGTTTTGCC TTATGCCCCA AGGCTGCCAA
AGCCATTGGC AACTGGGACA ACCGCAGCAG TTTATGCATT TGTATTTTAG CGATGAACAT
CTGAAGAAAC TGGCCGTGCG GGTCTTTGAT AAAGATCCAC GCCAAGTGCG TTTACCTGAG
CTGACCTTTG TCGACAATCC GAGGTTAGAG GCGCTATTTA GGCATCAAGT TGCCGGGCTC
AATTGGCAGA CCAGTGATAA CCATCTAATG ATGGAACAGG TAACCGACAC TGTGCTGGTG
ACGTTACTGC AAAGTTCCGG CTTTAATTTG TCGGTGGGGC CAATCAAGGG CGGGCTAGCA
CCTAAAGTGG CTAAAGCGAT CAAAGAGTTT ATTTATTGCC ATTCACATCG GCAGATTTAC
TTGTCTGAAC TGGCCGAGAT TGCTCAGCTT AGCGAGTACC ATTTTTGCCG CATGTTTAAA
TGCCAATTTG CGATGACGCC GCAGGAATAT TTGCTACAAG TGCGCATCGA AAAGGTCAAA
CAAAGCTTGA GTCATTCAAC GCAATCCTTG ACCGATATCG CCCTCAATAA TGGCTTCGCT
AATCAAAGCC ATATGGGCCG TTACTTTAAA AAACTCAGCG GCATGTCACC GGGCGAATAT
CAAAAACATC ATCAAGGCCG CTAG
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| Protein sequence | MEPKYTSFDK SAKTCLRKQV ITEDLSWAHY QNAGERLYYQ NDTQHTLSMY LDGGYETHRT
DIKADYGAPS KFCLMPQGCQ SHWQLGQPQQ FMHLYFSDEH LKKLAVRVFD KDPRQVRLPE
LTFVDNPRLE ALFRHQVAGL NWQTSDNHLM MEQVTDTVLV TLLQSSGFNL SVGPIKGGLA
PKVAKAIKEF IYCHSHRQIY LSELAEIAQL SEYHFCRMFK CQFAMTPQEY LLQVRIEKVK
QSLSHSTQSL TDIALNNGFA NQSHMGRYFK KLSGMSPGEY QKHHQGR
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