Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3164 |
Symbol | |
ID | 5372556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3773983 |
End bp | 3774906 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640831417 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001367357 |
Protein GI | 153001676 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.868518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACAT CGACCTATGC TATACGCAAC ACAGTTAACG CCACATTGAA GGCCTCGTCT AAAATCAGTC TAGCCGCTAC CTTACTGCTA GCGGGACTCG GCGCGGTCAA TGCGGCACCA TTGCAAGTGA GCCATTTTAA TCCGGGCGAA AACAGCATCT TTGCCGTGTC ATCGAGCTTT ATCAGCGGCG AACACGAAAT GATGTTAGTC GATGCACAAT TTCAAAATAA CGATGCCCAA ACCTTGGTTG ATACCATTAA GGCCAGCGGT AAAAAACTGA CTCAGGTGTA TATCAGTCAT AGCGATCCTG ACTTTTATTT CGGTTTAGCC GTGATTAAAA AGAATTTCCC CGATGCACAA ATCGTCGCGA CTCAAACCAC AGTTGATGCC ATTAAAGCCT CAATGGAAGG CAAGCTCGCC TACTGGGGTC CGATTTTAAA GGACAATGCG CCAAGTGAAT TAGTGTTACC TAAGGCGATT CACAGCGACA CTTTCACCAT CGACGGTGAG CAAGTGATTA TCGAAGGTTT CAATGATAAA CACCCTAAAC ACACTTTCCT GTGGGTGCCA TCGGCAAAAA CCATTACAGG TGGCGTAGAA GTATTTGATA ACACGCATGT TTGGATGGCT GACACTCAAA CTACCGCAGA GCGTCAGGAA TGGTTAACTC ATTTAGATGC GATGGAAAAA CTGCTGCCGA CCACAGTGAT CCCAGGACAC TATTTAGGTG AAGCGCGATT TGATACCCGC GCCATCGGTT TTACCCGTGA CTATGTAAAA GCTTTTGAAG TCGCAGCAAA CGCCTCAAAA GATTCAGCCG AATTAATCCA AAAGATGCTG GCGCTATACC CACAAATGCC AGCCGATGCA GGGCTTGAGA TCAGTGCCAA AGTTTACATG GGCGAAATGA CCTGGCCTAT GTAA
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Protein sequence | MNTSTYAIRN TVNATLKASS KISLAATLLL AGLGAVNAAP LQVSHFNPGE NSIFAVSSSF ISGEHEMMLV DAQFQNNDAQ TLVDTIKASG KKLTQVYISH SDPDFYFGLA VIKKNFPDAQ IVATQTTVDA IKASMEGKLA YWGPILKDNA PSELVLPKAI HSDTFTIDGE QVIIEGFNDK HPKHTFLWVP SAKTITGGVE VFDNTHVWMA DTQTTAERQE WLTHLDAMEK LLPTTVIPGH YLGEARFDTR AIGFTRDYVK AFEVAANASK DSAELIQKML ALYPQMPADA GLEISAKVYM GEMTWPM
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