Gene Shew185_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3160 
SymbolnrdR 
ID5371236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp3768676 
End bp3769125 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID640831413 
Producttranscriptional regulator NrdR 
Protein accessionYP_001367353 
Protein GI153001672 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.166441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTGTC CATTTTGCAG CGCGACAGAT ACTAAAGTCA TCGATTCTCG ATTAGTGGCG 
GAAGGCCATC AAGTGCGCCG TCGCCGAGAA TGCACCGAAT GCCATGAAAG ATTTACCACC 
TTTGAAGGTG CCGAATTAGT CATGCCTAGG GTGATTAAGC GCGATGGTTC ACGCCAACCC 
TTCGATGAAG AAAAACTCCA AGGTGGCATG TTGCGCGCGG TTGAAAAACG CCCTGTGTCT 
ATGGATGAAA TCGAGCAAGC GCTTAGCAAA ATCAAATCTA CCCTGCGCGC CACTGGCGAA 
CGGGAAGTGC CATCAGAAAT GGTGGGTAAC TTAATGATGG AGCAATTGAT GAGCCTAGAT 
AAAGTCGCCT ACATACGTTT TGCTTCTGTG TACCGCGCCT TTGAAGACGT ATCTGAATTT 
GGTGAAGCCA TCGCCAAACT GCAAAAGTAG
 
Protein sequence
MHCPFCSATD TKVIDSRLVA EGHQVRRRRE CTECHERFTT FEGAELVMPR VIKRDGSRQP 
FDEEKLQGGM LRAVEKRPVS MDEIEQALSK IKSTLRATGE REVPSEMVGN LMMEQLMSLD 
KVAYIRFASV YRAFEDVSEF GEAIAKLQK