Gene Shew185_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3130 
Symbol 
ID5372027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3734114 
End bp3734749 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content48% 
IMG OID640831384 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_001367324 
Protein GI153001643 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.507511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGAG TTGCCTTAAC ATCGGCGGTG AACTTAGCTA AAAAGCTTCA TGATGCGGGG 
ATCCGCAATC AAGCCGTGTT AAAGGCGATA TCGCATACGC CGCGGGAAAT GTTTCTCGAT
AATGCGCTAG CCCATAAAGC CTATGAAAAT ACCGCTTTAC CGATTGGCCA AGGGCAAACC
ATCTCGCAGC CTTATATCGT CGCCCGTATG ACCGAACTCT TACTGCATAA GATGCCCCAG
CGCGTATTAG AAGTGGGTAC AGGATCGGGT TATCAGGCGG CAATTTTGGC GCAATTAGTG
CCGCAGCTTT GTACTATCGA GCGAATAAAA GGCTTACAAA TTCAAGCGAG ACAGCGCTTA
AAACGATTAG ATTTACATAA TGTGTCGTTT AAATATGGTG ATGGCTGGTT AGGTTGGGCG
AATCGTAGCC CGTTCGATGC CATTATGGTG ACCGCTGCCG CTTCGACTAT ACCTGAGGCC
TTATTGTCTC AATTAGCCGA GGGCGGAGTG TTAGTTCTGC CAGTCGGCGA AGATACCCAG
CAATTGATGC GAATCACTCG TACTGCGGAC CGCTTCAGTT CGGAAACAAT TGAAACGGTT
AAATTTGTCC CTTTGATTAA TGGAGAGTTA GCTTAA
 
Protein sequence
MTRVALTSAV NLAKKLHDAG IRNQAVLKAI SHTPREMFLD NALAHKAYEN TALPIGQGQT 
ISQPYIVARM TELLLHKMPQ RVLEVGTGSG YQAAILAQLV PQLCTIERIK GLQIQARQRL
KRLDLHNVSF KYGDGWLGWA NRSPFDAIMV TAAASTIPEA LLSQLAEGGV LVLPVGEDTQ
QLMRITRTAD RFSSETIETV KFVPLINGEL A