Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3130 |
Symbol | |
ID | 5372027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3734114 |
End bp | 3734749 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640831384 |
Product | protein-L-isoaspartate O-methyltransferase |
Protein accession | YP_001367324 |
Protein GI | 153001643 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.507511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCGAG TTGCCTTAAC ATCGGCGGTG AACTTAGCTA AAAAGCTTCA TGATGCGGGG ATCCGCAATC AAGCCGTGTT AAAGGCGATA TCGCATACGC CGCGGGAAAT GTTTCTCGAT AATGCGCTAG CCCATAAAGC CTATGAAAAT ACCGCTTTAC CGATTGGCCA AGGGCAAACC ATCTCGCAGC CTTATATCGT CGCCCGTATG ACCGAACTCT TACTGCATAA GATGCCCCAG CGCGTATTAG AAGTGGGTAC AGGATCGGGT TATCAGGCGG CAATTTTGGC GCAATTAGTG CCGCAGCTTT GTACTATCGA GCGAATAAAA GGCTTACAAA TTCAAGCGAG ACAGCGCTTA AAACGATTAG ATTTACATAA TGTGTCGTTT AAATATGGTG ATGGCTGGTT AGGTTGGGCG AATCGTAGCC CGTTCGATGC CATTATGGTG ACCGCTGCCG CTTCGACTAT ACCTGAGGCC TTATTGTCTC AATTAGCCGA GGGCGGAGTG TTAGTTCTGC CAGTCGGCGA AGATACCCAG CAATTGATGC GAATCACTCG TACTGCGGAC CGCTTCAGTT CGGAAACAAT TGAAACGGTT AAATTTGTCC CTTTGATTAA TGGAGAGTTA GCTTAA
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Protein sequence | MTRVALTSAV NLAKKLHDAG IRNQAVLKAI SHTPREMFLD NALAHKAYEN TALPIGQGQT ISQPYIVARM TELLLHKMPQ RVLEVGTGSG YQAAILAQLV PQLCTIERIK GLQIQARQRL KRLDLHNVSF KYGDGWLGWA NRSPFDAIMV TAAASTIPEA LLSQLAEGGV LVLPVGEDTQ QLMRITRTAD RFSSETIETV KFVPLINGEL A
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