| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3127 |
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| Symbol | |
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| ID | 5372452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3729282 |
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| End bp | 3731852 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640831381 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001367321 |
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| Protein GI | 153001640 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.407005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTAA TTGATACCGA TGATTTAGAA AAACATACTC CTATGATGCG TCAGTACTTG
ACCATGAAAG CAGAACATCA CGACATGTTA CTGTTTTATC GCATGGGTGA CTTCTACGAG
TTGTTTTATG ACGATGCTAA ACGTGCTTCT GAGCTGTTAG GCATTTCACT CACGGCGCGC
GGTAAAAGTG GTGGCGATCC TATCCCCATG GCGGGACTGC CTTACCATGC TGTGGAAGGC
TATCTTGCGA AATTAGTTCA AATTGGTCAA TCGGTTGCGA TATGTGAACA AATTGGCGAC
CCAGCAACCT CTAAAGGTCC TGTTGAGCGT AAAGTGGTGC GTATCGTCAC GCCTGGCACC
TTAACCGACG AAGCCCTGCT GCAGGAACGC CAAGACAATC TATTGGCAGC GGTTTATCAA
GGTAAAATCG GTTTTGGTTA TGCCACTCTG GATGTTTCAT CCGGACGTTT TGTGATTGCC
GAGCTCGACA CGCGAGAGTC ATTAGAAGCT GAATTGCAAC GCACTAATCC CGTTGAAATT
CTCTACAGTG AAGACTTTGG CGAATTAGGT CTACTAAACG GTTTTAAAGG TAAACGTCGT
CGCCCTGAAT GGGAATTTGA TTACGACACT AGCATCAAGT TACTGCTGGC TCAGTTTGGC
ACGAAAGACT TGCATGGTTT TGGTATCGCA GATGCACGTT TATCACTGCA GGCTGCGGGT
TGCTTGATGC AATATGTCAA AGACACACAG CGCACAGCCC TACCCCATAT CAATGCCATT
ACCCGCTTTA ATCAAACCGA TAGCATAGTG CTCGATGCGG CAACGCGCCG AAATCTAGAA
CTCACTCAAA ACCTTGCCGG TGGTCGCGAT AATACCTTAG CCGCAGTATT GGACAACACG
GCGACGCCTA TGGGCAGCCG CATGTTGCAA CGCTGGATCC ATCAGCCGCT GCGAGATCCA
AAACACATCA AAGCACGCCA ACAGGCGGTG ACTGAACTAC TCGATACCGC CGCCCACGAA
GGTTTGCATG AACAGTTAAA AGCACTTGGC GATATTGAAC GTATCATGGC AAGACTCGCG
CTGCGTACCG CTCGCCCAAG AGACTTTGCC CGTTTACGTC AAGCGCTGGG CTTATTACCT
GAATTACAAC AGAGTTTAAG CACACTGAGC GCGCCGCACA CAACTCAATT ACGGCAACAC
TTAGGTGAGT TCCCCGCAGA ACAAGCCCTG CTTGAGCGCG CGATAGTCGA TAATCCTCCC
ATGCTTATCC GCGATGGTGG GGTGATCCGT GAAGGCTATA ACAGCGAATT AGATGAATGG
CGCGGCCTTA GCGAAGGTGC GAGCGATTAC TTAGTACAAC TCGAAGCCAG AGAAAAAGAA
CGTACAGGTA TCAACACACT TAAAGTCGGC TATAACCGTG TACACGGCTA TTACATTGAA
GTGAGCCGCT TGCAATCCTC GCAGGTGCCG CTCAATTATC AACGACGTCA AACCCTTAAG
AATATGGAGC GTTATATCAC GCCCGAACTT AAGGAGTACG AAGAGAAAGT GCTCTCGAGC
CAAGGTAAAG CGCTGGCACT CGAAAAGCAA TTATGGGAAC AGTTATTCGA TTTTATTCTG
CCAAAATTGC ATGAATTACA AGATTTTGCT CGAGCGGCGG CTGAGCTTGA TGTGTTGAGT
AACTTTGCCG AACGCGCCGA AACCTTAGGC TACACTTGCC CAGAGCTGAG CCAAGATATC
GGCGTACAGA TAGAGGCTGG TCGTCACCCA GTGGTGGAGC GTGTGAGTCA AACACCGTTT
ATCGCTAACC CAGTCACCTT GCACAATCAA AGACGTATGT TGATTGTCAC CGGACCTAAC
ATGGGCGGTA AATCGACCTA TATGCGCCAA GTCGCCTTGA TCACGCTGAT GGCCCACATT
GGCTGTTTTG TGCCAGCAGA TCGCGCACTG ATCGGCCCTA TCGATCGCAT CTTTACACGT
ATTGGCGCCT CCGACGATCT GGCCTCTGGT CGTTCAACCT TTATGGTAGA AATGACAGAA
ACTGCCAACA TTCTACACAA CGCCACCGCC AGTAGCTTAG TGTTAATGGA TGAAATCGGC
CGCGGCACAT CCACCTATGA TGGTTTATCG CTCGCTTGGT CGGCAGCAGA GTATTTAGCC
CAGCAAGTCG GCGCTATGAC CCTATTCGCC ACCCATTATT TTGAACTAAC TCAGTTACCT
GAATTAATGG CTGGTGTTTA CAATGTGCAC CTCGATGCCA TTGAACACGA CGATACCATC
GCCTTTATGC ATGCAGTGCA AGAAGGCGCC GCTAGTAAAA GCTACGGCTT ACAAGTTGCG
GCGCTTGCCG GCGTACCAAA CAAAGTGATT AAAGCCGCTA AACATAAGTT GCAGCAATTG
GAGAGTCGCG ATCATCAAGC TGAAGGAACG AGGACGCCTA TTCAAAGCTT ACTCGCGTTA
CCTGAACCAG TTGAGAATCC AGCGTTAACG AAGTTAAGTA GCATTAATCC CGATAACTTA
ACGCCAAAGC AGGCACTTGA TTTGCTCTAT GAGCTGAAAC GTCTGAGCTA A
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| Protein sequence | MNVIDTDDLE KHTPMMRQYL TMKAEHHDML LFYRMGDFYE LFYDDAKRAS ELLGISLTAR
GKSGGDPIPM AGLPYHAVEG YLAKLVQIGQ SVAICEQIGD PATSKGPVER KVVRIVTPGT
LTDEALLQER QDNLLAAVYQ GKIGFGYATL DVSSGRFVIA ELDTRESLEA ELQRTNPVEI
LYSEDFGELG LLNGFKGKRR RPEWEFDYDT SIKLLLAQFG TKDLHGFGIA DARLSLQAAG
CLMQYVKDTQ RTALPHINAI TRFNQTDSIV LDAATRRNLE LTQNLAGGRD NTLAAVLDNT
ATPMGSRMLQ RWIHQPLRDP KHIKARQQAV TELLDTAAHE GLHEQLKALG DIERIMARLA
LRTARPRDFA RLRQALGLLP ELQQSLSTLS APHTTQLRQH LGEFPAEQAL LERAIVDNPP
MLIRDGGVIR EGYNSELDEW RGLSEGASDY LVQLEAREKE RTGINTLKVG YNRVHGYYIE
VSRLQSSQVP LNYQRRQTLK NMERYITPEL KEYEEKVLSS QGKALALEKQ LWEQLFDFIL
PKLHELQDFA RAAAELDVLS NFAERAETLG YTCPELSQDI GVQIEAGRHP VVERVSQTPF
IANPVTLHNQ RRMLIVTGPN MGGKSTYMRQ VALITLMAHI GCFVPADRAL IGPIDRIFTR
IGASDDLASG RSTFMVEMTE TANILHNATA SSLVLMDEIG RGTSTYDGLS LAWSAAEYLA
QQVGAMTLFA THYFELTQLP ELMAGVYNVH LDAIEHDDTI AFMHAVQEGA ASKSYGLQVA
ALAGVPNKVI KAAKHKLQQL ESRDHQAEGT RTPIQSLLAL PEPVENPALT KLSSINPDNL
TPKQALDLLY ELKRLS
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