| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3116 |
|---|
| Symbol | |
|---|
| ID | 5372284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3712607 |
|---|
| End bp | 3713116 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640831362 |
|---|
| Product | RDD domain-containing protein |
|---|
| Protein accession | YP_001367310 |
|---|
| Protein GI | 153001629 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.181309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAATA CCGAACATGC TAACTTTCCC CGTGCGGGAT TCTTTCGCCG CTTAGGTGCT
GCCGTTTACG ATTCGCTGTT AGCCGTGGCC GTTTACATGG TTTCTGGCGC TGTAGGCTTT
GGCATTTTCT ACGGCCTTAC CGCTTCAGGA TTGGCTGGCA TGAATGGCTT TGAGCATGTC
TCTGACGCGC TCAATGGCAC ACCGATTTAC CACGGTATTT ACCAACTCTG GCTCGTCTTG
TGTGTTGGCA CTTTCTACGC CTTGTTCTGG AGTAAGGGCG GTCAAACCTT AGGGATGCGT
GCTTGGCGGC TTAAGATCCA ACATCCAAAC GGCCAAAACT TAAGCATGAT CACAGCTTAT
GCGCGTATTG TTTGGTCACT GCTCGGCATT GGTAATCTGT GGATCCTCAT CAATGGCAAC
AAGCTTGCCC TGCAAGATAG TATGACCCGC TCAGAAGTGG TTGTATTGTC TAAAGAAGCC
AATCAAATGC GTAACTGGCA CGGGGCATAA
|
|---|
| Protein sequence | MLNTEHANFP RAGFFRRLGA AVYDSLLAVA VYMVSGAVGF GIFYGLTASG LAGMNGFEHV
SDALNGTPIY HGIYQLWLVL CVGTFYALFW SKGGQTLGMR AWRLKIQHPN GQNLSMITAY
ARIVWSLLGI GNLWILINGN KLALQDSMTR SEVVVLSKEA NQMRNWHGA
|
|---|
| |