Gene Shew185_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3112 
Symbol 
ID5372097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3709735 
End bp3711240 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content52% 
IMG OID640831358 
Productcarboxypeptidase Taq 
Protein accessionYP_001367306 
Protein GI153001625 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2317] Zn-dependent carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.977178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCACAC CTAAGACTAA AGTACCAACG CCAAGTTACG ACAAACTGAC GGCACATTTC 
CAGAAAATTT CTCACTTTGA ACATTTCAGC GCTTTGGGTG ACTGGGATCA AGCGGCCATG
ATGCCGATGG GCGGTGGTCA AGATCGCGGC GATGCTATGG CAGAACTGGC GCTGCATATC
CACGGTCTCA AAACCTCAGC CGCCTTAGCC GAGCACTTAC ACGGCGCGGC GGACGAATCT
CTCTCAACAG AGCAAGAAGC CAATCTGCGG GAAATACTGT ACCAGTATCA ACAGGCCAAC
TTAGTGCCCG GCGACCTAGT ACAAGCCAAA ACCAAGATGG CCTATCAATG TGAGAATGCG
TGGCGCGAGC AGCGTAAAAA TAATGATTGG CTGGGCTTTA AGCCCAATCT AAAAGCGGTC
ATCGACCTTG CCAAGGAAGA AGCGCAGATC CGCGGCGAAG CGCAAAATAT CACGCCCTAT
GACGCCCTGC TCAATAAATT TGAACCGGGA ATGACCACGG CAAAGCTGGA ACAAACCTTT
GGCGGCCTGA AAGATTGGCT ACCGACACTC ATCCAAGAAG TGCTGTCTAA GCAGGCAAAC
GAGCCTAAGC TTGTGCTCAA TGGCCCCTTC GATATCAGCG CGCAGCAAGC CCTTGGCCGT
GACGTCATGG CGTTTTTGGG GTTTGACTTT AATCACGGCA GGCTGGATAT GAGTAGCCAT
CCATTTTGTG GCGGCGTGCC AAGCGATGTG CGGATAACGA CCCGCTACAA TGAGACCGAT
TTTAGCAGTG CTATCATGGG CATAGTTCAT GAAACAGGCC ACGCCAGATA CGAGCAAGGT
TTACCTCAAG CGTGGCGCGG TCAACCCGCT GGGCTTGCAC GTTCTATGGG CGTCCACGAA
AGCCAAAGTC TATTTTGCGA AATGCAGCTT GGGGCAAATC CGGCATTTCT ACGTCAGTTG
CAGCCTAAAA TCGCGCAGCA TCTTAACTGT CATTTCAGTG CCCAAGAATT AGCCCAGCAT
TACACCCGCG TGAATCCCGG ACTTATCCGC GTCGATGCCG ATGAAGTCAC TTACCCCTGC
CACATTTTAC TGCGGTTTGA GGCGGAAAAA GCCTTTGTCG ACGGCAGCTT AACCGTCGAT
GATTTACCTG ATTTTTGGTC GACGCAGATG CAACAATTAC TGGGGATCAA TACTGATGGC
AATTACCGCG ACGGTTGCAT GCAGGACATC CATTGGGCTG TCGGTGAACT AGGATATTTC
CCAAGTTACA CCTTAGGCGC CATGTATGCC GCTCAATGTC GTTTTGCGAT GGAAAAAGCC
TTAGGGCCGA TTGAAGCCCT AATCGATGCA GGCAAGTTGG ACTCGTTATT CCAGTGGCTG
CGCGAGCACA TTTGGTCGAA GGGATCCTTG CTCACGACCG ATGAACTGAT CCGCCAAGCA
ACGGGCGAAA CCTTAAATGG CCAATATCTT GAGCGTCACC TGCGCCAACG ATATCTGGGC
ATTTAA
 
Protein sequence
MGTPKTKVPT PSYDKLTAHF QKISHFEHFS ALGDWDQAAM MPMGGGQDRG DAMAELALHI 
HGLKTSAALA EHLHGAADES LSTEQEANLR EILYQYQQAN LVPGDLVQAK TKMAYQCENA
WREQRKNNDW LGFKPNLKAV IDLAKEEAQI RGEAQNITPY DALLNKFEPG MTTAKLEQTF
GGLKDWLPTL IQEVLSKQAN EPKLVLNGPF DISAQQALGR DVMAFLGFDF NHGRLDMSSH
PFCGGVPSDV RITTRYNETD FSSAIMGIVH ETGHARYEQG LPQAWRGQPA GLARSMGVHE
SQSLFCEMQL GANPAFLRQL QPKIAQHLNC HFSAQELAQH YTRVNPGLIR VDADEVTYPC
HILLRFEAEK AFVDGSLTVD DLPDFWSTQM QQLLGINTDG NYRDGCMQDI HWAVGELGYF
PSYTLGAMYA AQCRFAMEKA LGPIEALIDA GKLDSLFQWL REHIWSKGSL LTTDELIRQA
TGETLNGQYL ERHLRQRYLG I