Gene Shew185_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3109 
Symbol 
ID5370997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3706548 
End bp3708326 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content48% 
IMG OID640831355 
Productband 7 protein 
Protein accessionYP_001367303 
Protein GI153001622 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTGT TAACTGATAT CGGTTCATCC GGTAGTTTTA TTTTGCTCGT TGCCGGTATG 
GTGTTACTTG GCTTTATCGT GATCGGGTTA ATTTTTGCCA AGTTATATAA ACGTGCAACC
AAAGAAATGG CCTTTGTGCG TACCGGCTTT GGCGGTGAAA AAATCATTAA AGATGGCGGC
GCTATCGTAC TGCCAGTGCT GCATGAAACC ATTTCGGTCA ACATGAATAC CCTGCGTATC
GAAGTGGAAA AAACTCAGAA AGATGCGCTG ATCACCAAAG ACAGAATGCG TGTCGATGTG
AAGGCCGACT TCTATTTGCG AGTTGCTCCA AATTCAGATG GTATTTCGAT GGCGGCGCAA
ACCTTAGGTA CGCGCACAAA CCGCGTTGAA GAGCTTAAAA AGCTGATGGA GTCTAAGTTT
GTCGACGTGC TGCGCGCCGT TGCCGCTGAA ATGACCATGA CAGAAATGCA TGAGCAGCGT
GCCGATTTTG TGCAACGTGT GCAAAACAAC GTGGCTAACG ATCTGGAGAA AAACGGTCTC
GAACTTGAGT CGGTTTCGTT AACCGGGTTT GACCAAACTG ATCTACAGTT CTTCAATGAA
AACAACGCAT TCGACGCAGA AGGTCGTGCG CGTCTGGCGA AAATCATTGA AGAGAAACGT
AAAGAAACCA ACGATATCCA ACAGGATAAC CGGATTAAGA TCGAGCAACG AAACCTCGAA
GCCGAAAAAG AATCCCTAGA GATTGAAAAG TCGGAAGAAG AAGCACGCCT GATCCAGCAA
CAGTCTTTGG AATTTAAACG CGCCGATCAA AAAGCGGAAA TCATTAAGCA GAAAGAAAAC
AAGGCCCGTG AAGAACGCGA AGCCGAAATT GCTAAAGAAC GCGCTATCGA AACGGCTCAA
ATCGAAAAGA CGAAAGACAT CGAAACCCGC GAGATTGAAA AATATAAGTC GATTGAGCAA
TCGCGCATTC AACAGCAAAG GGATATCGAA GTTTCTGAGC AGGAAAAACG CATTGCGGTT
GCGGCCAAAT CTGAAGAAGA ATCTGCTGCC CGAGCCCGTG CAGCTGAAGC CGAAAAGCTG
AAAGTTGAAA AAGAAGAAGC GGTAATCACA GCGCGCCAAG TGGCCGAAGC GAATCGTCGT
AAAGAGATTG AAGTGATTGA CGCCCGTAAA GAAGCTGAGC GTGATGCGGT AGGCGTAACA
GTACAAGCCG AAGCCGAGAA ACGTGCCGCT GAAGACAGAT CGAGTGCGAT TTTGATTGAA
GCGCGCGCTA GCGCCGATGC GAAAAAACTG CAGGCCGAAG CAGATGAGAA AGTCTATGCC
GTTGAAGCTG CGGGTAAGCA AGCACTTTAC GAAGCTGAAA ACGTCTTGAG TGATGAGCAA
ATTGCCCTGC AAAAATCCCT CGCGATTTTA AAAGCGTTGC CTGAAATTGT GGCACAAGCC
GTTAAACCGT TGGAAAACAT CGAAGGCATT AAAATTCTTC AAGGCTATGG CGCTGGCAAT
CAATTTGCCG CGGGTGGCGA AGGCGCTCAC CATCAAGGTG GTATTGCCGA GCAAGTCACC
AGTGCCGCAT TAAACTATCG CGCTAATGCG CCGGTGGTTG ATGCCATGCT CAGAGAGCTG
GGCTTAGTGA ACGGCGATAC AGGCACCTTG AATGATTTAT TGAACGGCAA TAATACGTTA
ACCGCCGAGG CGTTAAGTGG TGTGAAGTCG TCTCATGCTG AGCTTAAAGA TTACAGCCAA
ACGCATGTGG TCGAGAGTCA AAGCGTGCCT AAGCTGTAA
 
Protein sequence
MDVLTDIGSS GSFILLVAGM VLLGFIVIGL IFAKLYKRAT KEMAFVRTGF GGEKIIKDGG 
AIVLPVLHET ISVNMNTLRI EVEKTQKDAL ITKDRMRVDV KADFYLRVAP NSDGISMAAQ
TLGTRTNRVE ELKKLMESKF VDVLRAVAAE MTMTEMHEQR ADFVQRVQNN VANDLEKNGL
ELESVSLTGF DQTDLQFFNE NNAFDAEGRA RLAKIIEEKR KETNDIQQDN RIKIEQRNLE
AEKESLEIEK SEEEARLIQQ QSLEFKRADQ KAEIIKQKEN KAREEREAEI AKERAIETAQ
IEKTKDIETR EIEKYKSIEQ SRIQQQRDIE VSEQEKRIAV AAKSEEESAA RARAAEAEKL
KVEKEEAVIT ARQVAEANRR KEIEVIDARK EAERDAVGVT VQAEAEKRAA EDRSSAILIE
ARASADAKKL QAEADEKVYA VEAAGKQALY EAENVLSDEQ IALQKSLAIL KALPEIVAQA
VKPLENIEGI KILQGYGAGN QFAAGGEGAH HQGGIAEQVT SAALNYRANA PVVDAMLREL
GLVNGDTGTL NDLLNGNNTL TAEALSGVKS SHAELKDYSQ THVVESQSVP KL