Gene Shew185_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3089 
Symbol 
ID5373482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3679245 
End bp3679859 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content50% 
IMG OID640831335 
ProductTetR family transcriptional regulator 
Protein accessionYP_001367283 
Protein GI153001602 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGGCA CAGACATTCA GACGGGGATG CCACCGGATA AACGGCAACA ATTGGTCACG 
ACCGCCTTTA AACTGTTTTA TTTTCAAAGT GTTCATGGAG TGGGGATTAA TCAGATCCTG
CAGGAATCGG CGATTGCCAA GAAAACCCTG TACCACCACT TTGCCAGTAA AGATGAGTTA
GTCGAAGCTG TGGTTCGCTA TCGCGACGAG GTCTTTTATC AATGGCTTAG CGAGCGAGTG
AACGCATTGC CAGCGGGACG GGAGGGCATT TGTGGGTTAT TTAGGGCGCT CGATGATTGG
TTTAATCAAA GGGTGCCGCA GTTGTGTGAG TTTCGCGGCT GTTTTTTTAT CAACGTCAGC
GCCGAATTTA CTGAGCAGAG CCATCCTGTA CACCAACTCT GCGCCCTGCA TAAACAGCGA
GTGGCGAGTT TAATTGAGCA GCAAGTCTCT GCATTGGGCT TGCCTAAAGC TAAGACCCAA
TACCTAGTTA CTGCGATAGG TTTACTCAAA GAGGGCGCGA TAGTGTCGGC ACAACTAAAG
GGTGACACTC AGTCAGCACT ATTGGCGTTA TCTGTGGTTG AGCAGCTGAT CGATGCCGCG
ACACATGCTG CTTAG
 
Protein sequence
MQGTDIQTGM PPDKRQQLVT TAFKLFYFQS VHGVGINQIL QESAIAKKTL YHHFASKDEL 
VEAVVRYRDE VFYQWLSERV NALPAGREGI CGLFRALDDW FNQRVPQLCE FRGCFFINVS
AEFTEQSHPV HQLCALHKQR VASLIEQQVS ALGLPKAKTQ YLVTAIGLLK EGAIVSAQLK
GDTQSALLAL SVVEQLIDAA THAA