Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3089 |
Symbol | |
ID | 5373482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3679245 |
End bp | 3679859 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640831335 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001367283 |
Protein GI | 153001602 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGGCA CAGACATTCA GACGGGGATG CCACCGGATA AACGGCAACA ATTGGTCACG ACCGCCTTTA AACTGTTTTA TTTTCAAAGT GTTCATGGAG TGGGGATTAA TCAGATCCTG CAGGAATCGG CGATTGCCAA GAAAACCCTG TACCACCACT TTGCCAGTAA AGATGAGTTA GTCGAAGCTG TGGTTCGCTA TCGCGACGAG GTCTTTTATC AATGGCTTAG CGAGCGAGTG AACGCATTGC CAGCGGGACG GGAGGGCATT TGTGGGTTAT TTAGGGCGCT CGATGATTGG TTTAATCAAA GGGTGCCGCA GTTGTGTGAG TTTCGCGGCT GTTTTTTTAT CAACGTCAGC GCCGAATTTA CTGAGCAGAG CCATCCTGTA CACCAACTCT GCGCCCTGCA TAAACAGCGA GTGGCGAGTT TAATTGAGCA GCAAGTCTCT GCATTGGGCT TGCCTAAAGC TAAGACCCAA TACCTAGTTA CTGCGATAGG TTTACTCAAA GAGGGCGCGA TAGTGTCGGC ACAACTAAAG GGTGACACTC AGTCAGCACT ATTGGCGTTA TCTGTGGTTG AGCAGCTGAT CGATGCCGCG ACACATGCTG CTTAG
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Protein sequence | MQGTDIQTGM PPDKRQQLVT TAFKLFYFQS VHGVGINQIL QESAIAKKTL YHHFASKDEL VEAVVRYRDE VFYQWLSERV NALPAGREGI CGLFRALDDW FNQRVPQLCE FRGCFFINVS AEFTEQSHPV HQLCALHKQR VASLIEQQVS ALGLPKAKTQ YLVTAIGLLK EGAIVSAQLK GDTQSALLAL SVVEQLIDAA THAA
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