Gene Shew185_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3088 
Symbol 
ID5370728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3678789 
End bp3679139 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content51% 
IMG OID640831334 
Producthypothetical protein 
Protein accessionYP_001367282 
Protein GI153001601 
COG category[S] Function unknown 
COG ID[COG3326] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTGT TATTGGTGGT GATTTTTCTT GCAGGCTTAA TCGGCGCAGC GCAGCAACAT 
ATGCTGCCCT ACGGCATTGC GGGCATGTAC CTCACACTGA GCCTGCTGAC CTTTATCGCC
TACGCTATCG ATAAATCCGC CGCTAAACGC GGTAAATGGC GCACTAAAGA AAGCACTTTG
CATCTGCTGG CGCTCATGGG CGGTTGGCCG GGCGCCCTGT TTGCCCAAAA CGTATTAAGG
CACAAGTCAG TTAAAGCCTC ATTTAGAAAC GTCTTCTGGC TCACCGTTGT CGCTAACTTA
GCCGTGCTGG GTTATGGCAT AAAAACCGGC GCCGTAGATA TGTTTATCTA A
 
Protein sequence
MPLLLVVIFL AGLIGAAQQH MLPYGIAGMY LTLSLLTFIA YAIDKSAAKR GKWRTKESTL 
HLLALMGGWP GALFAQNVLR HKSVKASFRN VFWLTVVANL AVLGYGIKTG AVDMFI