| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3084 |
|---|
| Symbol | |
|---|
| ID | 5371120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 3674827 |
|---|
| End bp | 3675654 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640831330 |
|---|
| Product | purine nucleoside phosphorylase |
|---|
| Protein accession | YP_001367278 |
|---|
| Protein GI | 153001597 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0005] Purine nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01697] inosine guanosine and xanthosine phosphorylase family
[TIGR01699] xanthosine phosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATG ATCCTGTTAT TTATGCCCTT GCGACGATTC GAGCCCGTAA ACCCAATTTC
TCTCCCCGCG CAGCGATGAT TTTGGGCTCA GGGCTTGGCG CGTTTGCCGA TAATTTAGAT
AACAAAGTAG TGATCCCCTA TGAAGAATTA GACGGCTTTC CCGTGAGTAC CGTCGTCGGC
CACTCGGGAG AGCTAGTGCT CGGCAGCTTA CATGGCGTAG ATATAGTGTG CATGAAAGGC
CGTGGGCATT TTTACGAGCA CCAAAGCATG AAAGTGATGA CTACGCCGGT ACGTACTTTC
AAACGCTTAG GGTGTGAATT GTTACTGGTG ACTAACGCTG CGGGGTCATT ACGACCAGAG
CGGATCGGCG TGGGTTCATT AGTGATTTTC AGCGATCACA TTAACACTAT GCCGGGTACG
CCCATGACGG GCGCAAATGA TGATAGTTAC GGTCCACGCT TTTTTAGCCT AGCCAATGCT
TATGATAAAG ACCTGAGAGC AGAAGCCTTA AGTGTCGCAA AAGCGGCTGG GATTGCAGTG
AATCAAGGGG TATTTGTGTC TTACTCTGGC CCGTGTTTTG AAACCGCGGC TGAAATCCGC
ATGATGCAAA TTATCGGTGG CGATGTGGTG GGAATGTCTG TGGTGCCAGA GGTGATTTCG
GCGGCGCATT GTGGTTTGCC CGTCTTGGCT GTGTGTGCCA TTACCAATAT GGCCGAAGGA
TTGGGGGATG TGCAGTTATC CCATGAACAA ACCTTAACAT GTGCTAAGCT TGCCGAAGCC
GACTTTATCC GTTTAATTGA GCATTTTACC GCAAGCCATT TTGCTTAA
|
|---|
| Protein sequence | MSHDPVIYAL ATIRARKPNF SPRAAMILGS GLGAFADNLD NKVVIPYEEL DGFPVSTVVG
HSGELVLGSL HGVDIVCMKG RGHFYEHQSM KVMTTPVRTF KRLGCELLLV TNAAGSLRPE
RIGVGSLVIF SDHINTMPGT PMTGANDDSY GPRFFSLANA YDKDLRAEAL SVAKAAGIAV
NQGVFVSYSG PCFETAAEIR MMQIIGGDVV GMSVVPEVIS AAHCGLPVLA VCAITNMAEG
LGDVQLSHEQ TLTCAKLAEA DFIRLIEHFT ASHFA
|
|---|
| |