Gene Shew185_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3082 
Symbol 
ID5371545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3672893 
End bp3673807 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content47% 
IMG OID640831328 
Producthypothetical protein 
Protein accessionYP_001367276 
Protein GI153001595 
COG category[S] Function unknown 
COG ID[COG2035] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATATT TGCTGACGTA TTTTAAGGGA ATGGCCATGG GCGCTGCCGA TGTCGTGCCA 
GGCGTTTCGG GCGGCACCAT AGCGTTTATT ACCGGTATTC TCGATACCTT GCTCGACAGT
GTAAAACGCA TCAATCCTTC CCTTTGGGGC GTGATTAAGT CGCAGGGCAT AAAAGGGGCA
TTTGCCCATA TTAATGGTGG CTTTTTAGTG AGTCTGCTGG CGGGGATCCT GACCAGTATT
TTTACCTTTG CTAAGTTGAT CTCTTGGTTA CTGGCGACGC ATCCGATCCC GATTTGGTCG
TTCTTTTTTG GGCTTATTAT TATCTCTGTT GTGCATATGC TTAAGCAAGT GAGTGGTTTC
ACTGTGGCAC GTTTAGGTTT ATTTGCCTTA GGTGTGCTGG CCGCATGGGC GATAACTGTG
TTAAATCCGG TCGCGGTAGA AGCCAGTTAC ATGAATATCT TCTTCGGTGG CGCGATTGCG
ATTTGTGCCA TGGTATTGCC GGGGATTTCA GGCAGTTTTA TCTTATTATT ACTGGGTTTA
TATCCCGTGG TTTTAGCCGC GGCAAAAAAT ATTCAGCTGG ATATTTTGGC CTGTTTCGCC
GTTGGCGCTG TGATGGGATT ACTGACATTC AGTCATCTAT TGTCGGCACT GCTGCGTAAG
CACCACGATG CCACTATCGT GTTTCTAACC GGATTAATGT TAGGCACCTT AGGTAAAATT
TGGCCATGGA AAGAAACTTT GACTTGGCGG ACTAACTCCC ACGGTGAGCA AGTGCCTTTG
CTGGAGCAAA ATATTTCGCC GCTTAATTTT GAGCAAGTGA CGGGCCAACC TTCGCAACTC
GCCTTTGCGA TTGTGTGTAT GATGGCAGCG ATTGCACTGG TATGGGGTTT AGAGAAAGTG
GGTAAAAGGG ATTAA
 
Protein sequence
MKYLLTYFKG MAMGAADVVP GVSGGTIAFI TGILDTLLDS VKRINPSLWG VIKSQGIKGA 
FAHINGGFLV SLLAGILTSI FTFAKLISWL LATHPIPIWS FFFGLIIISV VHMLKQVSGF
TVARLGLFAL GVLAAWAITV LNPVAVEASY MNIFFGGAIA ICAMVLPGIS GSFILLLLGL
YPVVLAAAKN IQLDILACFA VGAVMGLLTF SHLLSALLRK HHDATIVFLT GLMLGTLGKI
WPWKETLTWR TNSHGEQVPL LEQNISPLNF EQVTGQPSQL AFAIVCMMAA IALVWGLEKV
GKRD