Gene Shew185_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3080 
Symbol 
ID5371570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3670817 
End bp3672091 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content51% 
IMG OID640831326 
Producthypothetical protein 
Protein accessionYP_001367274 
Protein GI153001593 
COG category[S] Function unknown 
COG ID[COG3681] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCC AATGGCAGCA GTATATTCAC ATTATCAAAC AAGTCGTTAA GCCCGCATTA 
GGCTGCACTG AGCCCATCGC CGCCGCTTAC GCCGCCGCCG TCGCTCGCGC CTTACTGGGT
GTTGAGCCCG ATTCAATTGC TGTACAAGTG TCTGACAATC TTTATAAAAA CTCTATGGGT
GTGTTTGTAC CTGGTACAGG CAAAATCGGT CTGGCAATTG CCGCAGCGGC AGGCGCCATT
GCGGGTAATC CTGATGCGGG CTTAGAAGTA TTGGCAGTGA TCACGCCGGA GCAAGTCGCC
AAAGCACAGG CACTGATCGA TGCGGGTAAA GTCACAGTCG AGCGCACTGA AACGGCAGAA
TTTATCTATT GCTGTGTTAT CGCAAAAAAA GGCGACCGCG AAGCCCTAGT GAAAATCTGT
GGTGGCCATA CGCTTATTGC CGAAAAGCGC CTCAACGGCG AATCCGTCTT CAGTGTCGAT
AGCACGCAAG CTAAAGCCAC GGGTTCCATC TGTGAAGGCG TGGATATCAC TATCGAGTCC
ATTTATCGCT TCGCCCAAGA AGTCCCCTTC GAAGAGATCA AGTTCATCCT CGAAGCCTCT
GAGCTGAACG GCAAATTATC CGATGAAGGC ATGGCGAATC CCTATGGACT CGAAGTCGGT
CGCACCATGA AAAGCGGCAT AGCCGCCGGC ATTATTGGTG AAGATTTACT CAATAAAATC
GTGATGTTAA CGGCTGCAGC CTCAGATGCG CGCATGGGCG GTGCTAATTT GCCCGCCATG
AGTAATCTTG GCAGTGGCAA CCAAGGCATC GCCGCGACTA TTCCCGTGGT ATTAACGGCG
CAATGCTATA AGGTTTCGGA AGAACAACTC GCCCGCGCGT TGATCATGAG CCATCTCGGG
GCGATTTATA TCAAGTCCCA TTACCCACCG CTGTCGGCAT TTTGTGGCAA TACAGTCACC
AGCGCCGCCG CGTCTATGGC AATGGTGTAT TTGGCGGGAG GTTCGTTCGA ACAATCCTGT
TTCGCGATTC AAAACGTGAT CAGCGATAGC TCGGGCATGG TGTGTGACGG CGCTAAAGCC
TCCTGCGCCA TGAAGGTCAG CACGTCTTCC AGTGCGGCCG TACGCTCATT TTTGATGGCG
CTCAGTAGTC ACAATGTCTC CGGCCAAGGT ATTATTGCAA CCGATGTTGA AAAAACCATT
AAAAACATTG GCAAAATGAT CCTCAATGGC ATGTCATCCA CAGATGTCAC TATTATCGAT
ATTATGTCGG CATAA
 
Protein sequence
MKPQWQQYIH IIKQVVKPAL GCTEPIAAAY AAAVARALLG VEPDSIAVQV SDNLYKNSMG 
VFVPGTGKIG LAIAAAAGAI AGNPDAGLEV LAVITPEQVA KAQALIDAGK VTVERTETAE
FIYCCVIAKK GDREALVKIC GGHTLIAEKR LNGESVFSVD STQAKATGSI CEGVDITIES
IYRFAQEVPF EEIKFILEAS ELNGKLSDEG MANPYGLEVG RTMKSGIAAG IIGEDLLNKI
VMLTAAASDA RMGGANLPAM SNLGSGNQGI AATIPVVLTA QCYKVSEEQL ARALIMSHLG
AIYIKSHYPP LSAFCGNTVT SAAASMAMVY LAGGSFEQSC FAIQNVISDS SGMVCDGAKA
SCAMKVSTSS SAAVRSFLMA LSSHNVSGQG IIATDVEKTI KNIGKMILNG MSSTDVTIID
IMSA