Gene Shew185_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3070 
Symbol 
ID5373244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3660986 
End bp3661939 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content46% 
IMG OID640831316 
Producthypothetical protein 
Protein accessionYP_001367264 
Protein GI153001583 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAGT TTAACCCGCA GCGAATTCAG ATTGGGATCA GTGCTTGCTT ATTAGGGGAG 
AAGGTTCGTT TTGATGGCGG ACATAAAAAT TCTACCTATT GTAATCAAGA GATTAAGCAA
TTTTTCGATT ATGTGCCTAT CTGTCCAGAA ATGGCGATTG GCCTAGGTGC ACCCCGTAAA
AGTATCCGTT TAGTCCGTGA TGGTGAAATC ATCTTAGTGC AGAGCGGTGA CGGTAGCTTA
GATGTGACCG ATAAGCTCAA TGAATACAGC GAAAACAAGG TTGAAGAGCT TGATTTCCTC
GGCGGATACT TGCTTTGCGC TAAGTCGCCA ACCTGCGGCA TGGAGCGGGT GACAGAGTAC
AAAATTGGCA CTAACAATGG CTCTAAGTCG GGGATTGGTG TGTTCGCCCG CAAGTTGATG
GAGCGATATC CACTATTGCC TGTGGAAGAA GAAGGCCGCT TGCATGACAT GGTGCTACGG
GAGAACTTTT TCACCCGCGT TTATGCCTAT CACGATTGGC ACCTGATGAA GCATGAAGGG
CTGACTAAGC ATAAGTTAGT GAAGTTTCAT TCCCGCTATA AATATTTATT AATGGCGCAT
AGCCCTACAT GGTATCGCGA GCTTGGGCCG ATAGTGGCCA ATATTGAGGA TCTTGAACAA
AGCGCAACCC GCTACTTTGA AGGCTTTATG ACGGCCCTCA AAATCAATGC GACCCGTAAA
AATCATACCA GTACGCTGCA GCATATTCAG GGCTACTTTA AAAAGCATTT GAGCAAAGAG
CAAAAGACAG AACTGTCTGA AGCGATTATG AAATATCGCG AAGGTTTATT GCCTCTGTTA
GTGCCTATCA CGCTTATCAA CCATTATCTG CGGGAATTCC CAACGCCTTA CATAGAAGAG
CAAGTGTATT TGAATCCCCA TCCAGAGGCG TTGAAGCTGC GCTATGCCTA CTAG
 
Protein sequence
MYKFNPQRIQ IGISACLLGE KVRFDGGHKN STYCNQEIKQ FFDYVPICPE MAIGLGAPRK 
SIRLVRDGEI ILVQSGDGSL DVTDKLNEYS ENKVEELDFL GGYLLCAKSP TCGMERVTEY
KIGTNNGSKS GIGVFARKLM ERYPLLPVEE EGRLHDMVLR ENFFTRVYAY HDWHLMKHEG
LTKHKLVKFH SRYKYLLMAH SPTWYRELGP IVANIEDLEQ SATRYFEGFM TALKINATRK
NHTSTLQHIQ GYFKKHLSKE QKTELSEAIM KYREGLLPLL VPITLINHYL REFPTPYIEE
QVYLNPHPEA LKLRYAY