Gene Shew185_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3040 
Symbol 
ID5373714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3633981 
End bp3634679 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content47% 
IMG OID640831282 
Productalanine racemase domain-containing protein 
Protein accessionYP_001367234 
Protein GI153001553 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000913695 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAA TAGCAGACAG ACTCGCAATC GCCCAGCGCA GGATCGCACA AGCGGCGCAA 
AAATGTGCCC GCCAACCTAG CAGTATTAGC TTACTTGCCG TCAGCAAGAC CAAACCTATT
GAAGACATTA TAGCAGCCTA TCAAGCGGGT CAGCGTTGCT TTGGCGAAAA CTATGTCCAA
GAAGGTGCGG AGAAAATTAT CGCACTCAAG GGGGATTTTC CGGACATTGA ATGGCACTTT
ATCGGGCCAC TCCAATCCAA CAAAACCAGC ATAGTCGCCC AGCATTTCGA TTGGATGCAC
ACTGTCTCGC GCGACAAAAT TGCCCAACGT CTCAATGACC AACGTCCAGC TGAATTAGCG
CCATTAAACA TCTGCATTCA AATTAATATC AGTGCTGAAG ACACAAAATC TGGCATAGAT
GCGGCGCAAA TGCTGCCACT GGCAGAGCTT ATCGCTCAGT TACCTAATCT TGCACTGAGA
GGCCTAATGG CAATCCCAAC GGCTACTGCA GATACTGAGT TACAGCTTAA AGAGTTTTCT
ATGTTAAACA ATCTATTTCA AGAACTTAAA TCACATTACC CCAATGTAGA CACGCTTTCC
ATGGGGATGA GTAATGACCT AGATGCAGCG ATTAGCTGCG GTTCAACTAT GGTGCGTATT
GGCAGTGCCA TTTTTGGTGA GCGCAATTAC GCTGCGTAA
 
Protein sequence
MTTIADRLAI AQRRIAQAAQ KCARQPSSIS LLAVSKTKPI EDIIAAYQAG QRCFGENYVQ 
EGAEKIIALK GDFPDIEWHF IGPLQSNKTS IVAQHFDWMH TVSRDKIAQR LNDQRPAELA
PLNICIQINI SAEDTKSGID AAQMLPLAEL IAQLPNLALR GLMAIPTATA DTELQLKEFS
MLNNLFQELK SHYPNVDTLS MGMSNDLDAA ISCGSTMVRI GSAIFGERNY AA