Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3030 |
Symbol | |
ID | 5370152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3626271 |
End bp | 3626912 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640831272 |
Product | hypothetical protein |
Protein accession | YP_001367224 |
Protein GI | 153001543 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000814353 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGAGA CGCAGATTAT TGGATTACTT TGGCTGATTG GTATTATTGC CGAGGCTATG ACGGGCGCTC TGGCGGCGGG TCGCAAGCAG ATGGATTTGT TTGGTGTGGT GATCATTGGC TGCGCAACGG CGATTGGTGG CGGCACACTA AGGGACATGA TGCTCGGCAA TTACCCCTTA ATTTGGGTTG AGCACGTGAA TTACCTCATT GCGATTGCAT TCGCTTCTTT GCTCACTGTC GCTATCGCCC CTGTGATGCG TTATCTGTCT AAGTTATTTT TGGCTATCGA TGCCTTAGGC TTAGCCGTGT TCTCTATCGT GGGCGCACAG AAGACATTAA TGCTGGGATT TAGCCCAACG ATTGCTGTGG TGATGGGATT GGTGACGGGC GTCTTTGGTG GCGTTATCCG CGATATCCTG TGTAATCAAG TGCCTTTGAT TTTTAAGAAA GAACTCTATG CGGTGATTTC ATTACTGACG GCAGGCTTGT ATATCGTCTT AAAAGCCTAC CAATTAACCG AGTGGATTAA TCTGGTTATT TGTCTGAGTG TTGGTTTTAG CCTGCGGATG TTGGCGCTGC GCTATCATTG GTCTATGCCG ACCTTTGATT ATCAGGCCAA TGGCGATCAG CACACACATT AG
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Protein sequence | MHETQIIGLL WLIGIIAEAM TGALAAGRKQ MDLFGVVIIG CATAIGGGTL RDMMLGNYPL IWVEHVNYLI AIAFASLLTV AIAPVMRYLS KLFLAIDALG LAVFSIVGAQ KTLMLGFSPT IAVVMGLVTG VFGGVIRDIL CNQVPLIFKK ELYAVISLLT AGLYIVLKAY QLTEWINLVI CLSVGFSLRM LALRYHWSMP TFDYQANGDQ HTH
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