Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3028 |
Symbol | |
ID | 5370532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3624650 |
End bp | 3625477 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640831270 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001367222 |
Protein GI | 153001541 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000445897 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACC TTGAAGGTTT ATTAAAGCAA GCACCGGATC TGATTATGAC TTATGGCTTA AAAGTTTTAT TTGCCATTAT CATTTTCTTT GTTGGTAAAT ACTTTGCCGG CGTAGCGCAA AAGCTGGTTC GTAAATTACT TAACAGCCGT AAAGTTGATC CGACAGTTGT TTCATTTGTC GCAAACCTCG CTTGGGCAAT TGTGTTTGTT TTCGCAGTGA TTGCCACCTT AGGCCAAATT GGCGTACAAA CCGCATCATT GGTCGCCGTT ATCGGTGCCG CTGGTTTAGC GGTGGGTTTA GCGCTACAGG GTTCTCTGTC TAACTTCGCA TCGGGCGTGT TAATGGTGTT ATTCCGCCCT TGCCGCGTTG GTGACTATAT TGAAGCCGCT GGCATTGCCG GTACTGTTGA TGAAATCACT ATATTCTCAA CCAAACTTCG CACACCCGAT AACAAGGTTA TTGTGGCGCC TAATTCATCC ATCATGAATG GCACTATCAC TAACTATTCG GCAATGGATA CTCGCCGTAT CGATTTAGTG ATTGGCGTGT CTTATTCTGC CGATATCGCA CTCACGAAGA AAATCTTAAC TGAGATTTTA GACAACAACC AATATGTGTT AAAAGATCCA TCATATACAG TTGGACTGGC TGAATTAGCG AACTCTTCAA TTAATTTCGT GGTTCGCCCT TGGGTAAAAA CGGCTGATTA TTGGACGGCT CGTTTCCAAC TGCTTGAGCA AATCAAAAAT GCATTAGATG CAGCCGATAT CGGTATTCCA TTCCCACAAA TGGATATTCA TGTCAAAGAA TTGCCACTCA GCAAATAA
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Protein sequence | MENLEGLLKQ APDLIMTYGL KVLFAIIIFF VGKYFAGVAQ KLVRKLLNSR KVDPTVVSFV ANLAWAIVFV FAVIATLGQI GVQTASLVAV IGAAGLAVGL ALQGSLSNFA SGVLMVLFRP CRVGDYIEAA GIAGTVDEIT IFSTKLRTPD NKVIVAPNSS IMNGTITNYS AMDTRRIDLV IGVSYSADIA LTKKILTEIL DNNQYVLKDP SYTVGLAELA NSSINFVVRP WVKTADYWTA RFQLLEQIKN ALDAADIGIP FPQMDIHVKE LPLSK
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