| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3023 |
|---|
| Symbol | |
|---|
| ID | 5369914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3619376 |
|---|
| End bp | 3620200 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640831265 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001367217 |
|---|
| Protein GI | 153001536 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0902222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCA TTGTTATCAC GCTTATCCTC GGAGTCGGGG CAATCGCTTG GCTACTTTCA
AGTCGTTGGC GCAAAACCTT GCACCGCCGC CGAGTCACGA CCAAACCCTT TCCAAAAGAA
TGGCGCAGCA TTCTCAAAAA AAGACTGCCT TACTTCCATG CGTTACCGAC AGATTTACAG
CTACAGCTCA AACGGCTTAT CCAAATCTTC ATCGATGAAA AGGAGTTTGT TGGCTGCGAT
GATTTCGAGA TCACCGATGA AGTGAGAGTC ACTATCGCAG CACAGGCGTG CCTCCTGCTG
CTCAATCGAA AAACAGACTT TTACCCCAAA CTGAAACAAA TTTTGGTCTA TCCCGATGCC
TTTATCGTTA ATAATCAACA TAGAGACACG AGCGGTATCG TGTGGGAACA GCGCAATGTG
CTGGCGGGCG AATCTTGGGA ATACGGCAAA GTGGTGCTCT CGTGGAAAAA TACCTTAGAC
GGCGCCGCCG ATCCCCACGA TGGCAATAAT GTCGTGATCC ACGAGTTTGC CCATCAGCTC
GATCAAGAAG ACGGCCAAGC CAATGGCGCG CCGATACTGC AGCATTTTGC CGATTACAGC
ACTTGGTCAG AAGTGCTAAG CAAGGCTTTC ACCCAATTAC AGCACAGCGC AAACTTTGGC
ATACCCTCAA TATTTAATTA CTATGGTGCG ACGAATCCCG CTGAATTTTT TGCCGTTATT
ACTGAAGTCT TTTTTGAAAA GCCAGAGGAT TTCTACCAAC AACACCCAGA CTTGTATCGG
GAACTGAGCC GCTTTTATCA ACTCGATCCG ATAAACTGGC ATTAA
|
|---|
| Protein sequence | MLAIVITLIL GVGAIAWLLS SRWRKTLHRR RVTTKPFPKE WRSILKKRLP YFHALPTDLQ
LQLKRLIQIF IDEKEFVGCD DFEITDEVRV TIAAQACLLL LNRKTDFYPK LKQILVYPDA
FIVNNQHRDT SGIVWEQRNV LAGESWEYGK VVLSWKNTLD GAADPHDGNN VVIHEFAHQL
DQEDGQANGA PILQHFADYS TWSEVLSKAF TQLQHSANFG IPSIFNYYGA TNPAEFFAVI
TEVFFEKPED FYQQHPDLYR ELSRFYQLDP INWH
|
|---|
| |