| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3022 |
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| Symbol | |
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| ID | 5369913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3617525 |
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| End bp | 3619264 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640831264 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001367216 |
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| Protein GI | 153001535 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.238574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGCA CTAAACCGCT GAAAAGCCTA AAACAAAAAA TAACCTTAGC CTTCTATATC
ATAGTGGGCA TGGCGCTGTT TAATGGTGTC GTCGCCATAC TGCTGTCACA GCAACTGAAA
TCAGAAATTG AGCATTTAGT GGGAGTGGAT GTTGTTAAAG TCACCACTGC GCTGCAACTG
GCAAAAAACA GTGAAAAACT GCAAATCATC ACAGCGCGCT TAAATCATTA TGATAATGAA
CAGCAAAGAC TTCGCCTATT GAGTGAACTC TCCGCGCAGT GGGAACTATT AATTAATGAC
TCCCGATTAC TGGCCTTAAT TGAAACCTCT ACTGTCAGTA AGCAAGAATT GAATCACGCG
TTAGATATCC AACTTTACTA TTTACAACAG CTGCCATTAC TTGCCGAGTT AACCGATTCC
GCCCTACAAG CCAATTTACA AGCAACAAAT ATTCAAGCCA ATTTAACCTC AATGGCATCG
GGATTTACCG ATGAAATGCA GACCCAATTT CACAGCATCA ATGCCGATTC AGAGCGTCAG
CTTAAGCTGA AAAATTTTGA CAAGATTGCG ATGAATATCA ATACCAACCA GCAATTGTCT
CAATTTAGTC ATTTGGGAGA ACACTTATTT ACCCGCCTAT CTCAGGTAAA AATTATCGAC
AATCTAGTTG AGCTTAACCG CACCCAAAGA GAAGCGATGC GACTGCTGTT AAATATGGAG
GCGATTCTCG AGGGCGTTAG CGGGGATACC AGTTTATATT TCAATTTGTT ATCGCAAATA
AAACAGACCA TGGTCGGTGA AGATAACCTG TTTGAACTGT CCCGCAAGGC CATTAAAAGC
ACGCATATCG CCAATGCGCA TTTAGAGTAC CAAGCCGATG CCGCGCAAAT TGTCGCGACT
TATACTCAAA ATCTGGTCAA CCAAGTCGAG AATGAAATCC AACAAACGGG CGGCGAACTT
AAAAGCGACA GCACCGCATT TATCATATTG ATTTTCTGCA GTGGTATTCT GTATTGCTTC
TTCATCTGGC TCACCAGCTG GCACTTTATC ACTAAGGGCA TTATCAAACC TGTGATGGCG
ACGCGAGATG CCATGAACGC TATCGCCAAC GAAAAGCTCG ACACCCACAT GCCAGTCACT
GACAACCTAG AACTACAGCA AATGGTGAAC TCTTTAGAAA CCCTAAAAAG CTATGCGGCC
CAGGTTAAAG GAATGGCGGA AACCGACGGA CTAACAGGCT GCTACAACCG CCGTTATTTA
GACATACAAC TCCAAAAAGA ACTCGAGTAT GCAAGGGATC ACCATATGCC TCTTGGCATT
ATTCTGTTTG ATATTGATAA CTTTAAACAA TTTAACGACA GATATGGCCA TGTCGCCGGC
GATCAATGCC TGAAAAACAT TGTTAACGCC GCTAAATCCA TCTTAAAACG CCCAACTGAC
ATGCTTGCCC GCTATGGCGG TGAGGAATTT ATGATAGTGC TGCCATCGAG TCATCTCGAG
GAGGTCTATC AATTTGCCGA ACGATTACGG GAGAAAATCA TCAGCCTAGA AATTCCCCAT
GAAGACTCTC CCCATGCGGG CATACTTACC ATCAGCGCGG GGATTACTTG CTGGCAACTA
CCGCAACAGC TAGATGCCAA TAGTTTAATT AATCGCGCCG ATGAAGCCCT CTATCATGCC
AAACTGACGG GGCGTAACCG CACCGAGGCC CTCCTCGGCC AACCCATTCG GTATTCCTAA
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| Protein sequence | MTSTKPLKSL KQKITLAFYI IVGMALFNGV VAILLSQQLK SEIEHLVGVD VVKVTTALQL
AKNSEKLQII TARLNHYDNE QQRLRLLSEL SAQWELLIND SRLLALIETS TVSKQELNHA
LDIQLYYLQQ LPLLAELTDS ALQANLQATN IQANLTSMAS GFTDEMQTQF HSINADSERQ
LKLKNFDKIA MNINTNQQLS QFSHLGEHLF TRLSQVKIID NLVELNRTQR EAMRLLLNME
AILEGVSGDT SLYFNLLSQI KQTMVGEDNL FELSRKAIKS THIANAHLEY QADAAQIVAT
YTQNLVNQVE NEIQQTGGEL KSDSTAFIIL IFCSGILYCF FIWLTSWHFI TKGIIKPVMA
TRDAMNAIAN EKLDTHMPVT DNLELQQMVN SLETLKSYAA QVKGMAETDG LTGCYNRRYL
DIQLQKELEY ARDHHMPLGI ILFDIDNFKQ FNDRYGHVAG DQCLKNIVNA AKSILKRPTD
MLARYGGEEF MIVLPSSHLE EVYQFAERLR EKIISLEIPH EDSPHAGILT ISAGITCWQL
PQQLDANSLI NRADEALYHA KLTGRNRTEA LLGQPIRYS
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