Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3009 |
Symbol | |
ID | 5373355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3605827 |
End bp | 3606918 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640831251 |
Product | hypothetical protein |
Protein accession | YP_001367203 |
Protein GI | 153001522 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0289928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAACCC TCATCATTAT AGTGCTTGTC GCTGTCGGAG TTTCTTTTCT GTGCAGTGTG TTCGAAGCTG TTCTGCTATC GGTTACCCCA AGTTATATCG CATCACTCGA ACAAACTGAC AGTGCCGCAG CCGCGCGCTT GCGTAAACTG AAAGAAAATG TCGAAGCCCC TTTGGTGTCA ATCCTTACGT TGAATACTAT CGCCCATACC GTCGGCGCCG CCGTTGCGGG TGCGCAAGCA GCGAAAGTAT TTGGTGACGA TATGCTGGGT GTTTTCTCGG GCGTATTGAC CTTTATTATT CTGTTCTTCT CAGAAATTAT TCCTAAATCA TTGGGTGCCA ACCATTGGCG TCGCCTCGCA CCGAGCGTGT CTGTTGCCGT GATGTGGATG AAGCGTGTCA CTAGACCGCT GATCTGGATG TCGCAGCAAG TCACTCGTTT GATGGGCAAA GGTGATGAAG GCCATTATAT CCGCCAAGAA ATGAGCGCGA TGGCCAAAAT CGGCCATGAA TCCGGTGAGC TTGATGAGCA AGAGTCAAAA ATTCTGACGC AAATGCTCAA GGTACGTGAT ATGCCCGTTA CGGCAATCAT GACGCCACGC ACTGTGATGT TCTCGCTGCC AGTGGATCTG ACTCAAAATG AGTTTGTGCG CCAATATCGC GACAAACCTT TTACCCGTAT TCCCGTGTAC GACCAAGATC ATGATGATGT GATTGGTTAC ATTACCCGCA CCGATGTGTT ACTGGCTGAG CGTTATACGC CAGAAGCGCC AATTGGTGAG CTTAAACGGA GTTTATTTGT GGTGCCTGAA ACCGCAAAAA TTCTGCCACT GTTTGAGCGT ATGATTAAGC GTAACACCCA AATTGCTATG GTGGTTGACG AGTACGGCAG TAGCCAAGGT ATCGTGACTC AAGAAGATAT TATCGAATCT ATGTTAGGAT TAGAGATTGT CGATTTAAAC GATCCCGCGA CCGATATGCA GCAATTAGCA CGTAAACTTT GGACTAAGCG CATGAAGCAA AAAGGCATTC GCCTATCCGA TGACGGTGAT TTTGAAGCCG CATCCGATGA TGACGAAGCC AAATCCGGCT GA
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Protein sequence | MLTLIIIVLV AVGVSFLCSV FEAVLLSVTP SYIASLEQTD SAAAARLRKL KENVEAPLVS ILTLNTIAHT VGAAVAGAQA AKVFGDDMLG VFSGVLTFII LFFSEIIPKS LGANHWRRLA PSVSVAVMWM KRVTRPLIWM SQQVTRLMGK GDEGHYIRQE MSAMAKIGHE SGELDEQESK ILTQMLKVRD MPVTAIMTPR TVMFSLPVDL TQNEFVRQYR DKPFTRIPVY DQDHDDVIGY ITRTDVLLAE RYTPEAPIGE LKRSLFVVPE TAKILPLFER MIKRNTQIAM VVDEYGSSQG IVTQEDIIES MLGLEIVDLN DPATDMQQLA RKLWTKRMKQ KGIRLSDDGD FEAASDDDEA KSG
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